RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 XYLT2Q9H1B5 865 aa20.58■□□□□ 0.89
CCHCR1-210ENST00000464012 SMYD3Q9H7B4 428 aa20.58■□□□□ 0.89
CCHCR1-210ENST00000464012 LMAN1LQ9HAT1 526 aa20.58■□□□□ 0.89
CCHCR1-210ENST00000464012 THG1LQ9NWX6 298 aaKnown RBP20.58■□□□□ 0.89
CCHCR1-210ENST00000464012 ZMYM5Q9UJ78 669 aa20.58■□□□□ 0.89
CCHCR1-210ENST00000464012 F5P12259 2224 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 A8MXQ7 604 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 SPECC1L-ADORA2AF8WAN1 911 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 KIF20AO95235 890 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 STAU1O95793 577 aaKnown RBP20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 PLCB2Q00722 1185 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 MTAPQ13126 283 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 NCOA4Q13772 614 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 TSSK4Q6SA08 328 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 VSTM1Q6UX27 236 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 MON1AQ86VX9 555 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 ZNF687Q8N1G0 1237 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 MYCBPAPQ8TBZ2 947 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 C8orf33Q9H7E9 229 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 TDP1Q9NUW8 608 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 FBXO4Q9UKT5 387 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 FRMD4BQ9Y2L6 1034 aa20.57■□□□□ 0.88
CCHCR1-210ENST00000464012 MYO16Q9Y6X6 1858 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 VNN1O95497 513 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 C4BPAP04003 597 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 PTPN1P18031 435 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 CTHP32929 405 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 AP3M2P53677 418 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 ZNF667Q5HYK9 610 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 TRIM68Q6AZZ1 485 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 TXNDC11Q6PKC3 985 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 ADSSL1Q8N142 457 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 RIN3Q8TB24 985 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 MSANTD3Q96H12 275 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 MYRFLQ96LU7 910 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 CHRDQ9H2X0 955 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 KIF9Q9HAQ2 790 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 GKN1Q9NS71 199 aa20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 RBM12Q9NTZ6 932 aaKnown RBP20.56■□□□□ 0.88
CCHCR1-210ENST00000464012 F8VP50 259 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 CLDN5O00501 218 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 TRIM66O15016 1216 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 CKMP06732 381 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 NR2F2P24468 414 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 CDH8P55286 799 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 IFRD2Q12894 506 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 PON2Q15165 354 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 B3GALNT2Q8NCR0 500 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 SPATA17Q96L03 361 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 SLC22A12Q96S37 553 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 CYP2S1Q96SQ9 504 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 ZNF518BQ9C0D4 1074 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.55■□□□□ 0.887e-8■■■■■ 186.3
CCHCR1-210ENST00000464012 TRAF3IP3Q9Y228 551 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 ZFHX2Q9C0A1 2572 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 MYO15AQ9UKN7 3530 aa20.55■□□□□ 0.88
CCHCR1-210ENST00000464012 VPS13AQ96RL7 3174 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 TRAV19A0A0A6YYK7 116 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 C2orf78A6NCI8 922 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 LMNAP02545 664 aaKnown RBP20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 CHRNB1P11230 501 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 PIK3CAP42336 1068 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 CACNA2D1P54289 1103 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 USP46P62068 366 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 CLDN10P78369 228 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 ITPRIPL2Q3MIP1 535 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 DENND5BQ6ZUT9 1274 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 RALGPS2Q86X27 583 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 ARL14EPQ8N8R7 260 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 TMC2Q8TDI7 906 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 EBF3Q9H4W6 596 aa20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 PRMT8Q9NR22 394 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-210ENST00000464012 GOLGA6L4A6NEF3 574 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 KINO60870 393 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 FAM163BP0C2L3 166 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 USP17L7P0C7H9 530 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 TRIM49P0CI25 452 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 TRIM49CP0CI26 452 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 VAMP7P51809 220 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 MLLT6P55198 1093 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 PNOCQ13519 176 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 LRRC32Q14392 662 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 KCNB1Q14721 858 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 ZNF528Q3MIS6 628 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 ZACNQ401N2 412 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 WDR44Q5JSH3 913 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 CC2D1AQ6P1N0 951 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 C1orf228Q6PIY5 440 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 SMYD4Q8IYR2 804 aaPredicted RBP20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 GUF1Q8N442 669 aaKnown RBP20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 TMEM174Q8WUU8 243 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 CCDC34Q96HJ3 373 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 MED10Q9BTT4 135 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 B3GNT5Q9BYG0 378 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 ELOVL4Q9GZR5 314 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 SDCBP2Q9H190 292 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 SEMA4AQ9H3S1 761 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 MMRN2Q9H8L6 949 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 VRTNQ9H8Y1 702 aa20.53■□□□□ 0.88
CCHCR1-210ENST00000464012 HPS4Q9NQG7 708 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms