RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 TNK2Q07912 1038 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 OR6B3Q8NGW1 331 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 NELL1Q92832 810 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 SYAP1Q96A49 352 aaPredicted RBP20.24■□□□□ 0.83
VARS-220ENST00000461874 PCED1BQ96HM7 432 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 SPATA17Q96L03 361 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 CEP295NLQ96MC4 621 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 FAM83CQ9BQN1 747 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 KIF9Q9HAQ2 790 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 GKN1Q9NS71 199 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 PCDHGA2Q9Y5H1 932 aa20.24■□□□□ 0.83
VARS-220ENST00000461874 LRRIQ3A6PVS8 624 aaPredicted RBP20.23■□□□□ 0.83
VARS-220ENST00000461874 PHACTR2O75167 634 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 NR3C1P04150 777 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 CYP27A1Q02318 531 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 ZNF268Q14587 947 aaPredicted RBP20.23■□□□□ 0.83
VARS-220ENST00000461874 ITPRIPL2Q3MIP1 535 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 MDH1BQ5I0G3 518 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 TDRD10Q5VZ19 366 aaKnown RBP20.23■□□□□ 0.83
VARS-220ENST00000461874 TXNDC11Q6PKC3 985 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 TSSK4Q6SA08 328 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 FSIP1Q8NA03 581 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 NUP210Q8TEM1 1887 aaPredicted RBP20.23■□□□□ 0.83
VARS-220ENST00000461874 VRTNQ9H8Y1 702 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 ZSCAN32Q9NX65 697 aa20.23■□□□□ 0.83
VARS-220ENST00000461874 NXF1Q9UBU9 619 aaKnown RBP20.23■□□□□ 0.83
VARS-220ENST00000461874 OTOGLQ3ZCN5 2332 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 KINO60870 393 aaKnown RBP20.22■□□□□ 0.83
VARS-220ENST00000461874 C4BPAP04003 597 aaKnown RBP20.22■□□□□ 0.83
VARS-220ENST00000461874 PRR29P0C7W0 189 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 PTPN1P18031 435 aaKnown RBP20.22■□□□□ 0.83
VARS-220ENST00000461874 GRIK1P39086 918 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 BIRC3Q13489 604 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 WDR44Q5JSH3 913 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 ZBTB44Q8NCP5 570 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 RIN3Q8TB24 985 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 ATRIPQ8WXE1 791 aa20.22■□□□□ 0.83
VARS-220ENST00000461874 PATJQ8NI35 1801 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 RHOBTB3O94955 611 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 DPYDQ12882 1025 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 NCOA4Q13772 614 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 LRRC32Q14392 662 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 GAS6Q14393 721 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 KRBA2Q6ZNG9 492 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 SUMF1Q8NBK3 374 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 CCDC47Q96A33 483 aaKnown RBP20.21■□□□□ 0.83
VARS-220ENST00000461874 C8orf48Q96LL4 319 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 SLC22A12Q96S37 553 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 CYP2S1Q96SQ9 504 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 FAM126AQ9BYI3 521 aaPredicted RBP20.21■□□□□ 0.83
VARS-220ENST00000461874 GOLPH3LQ9H4A5 285 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 DPEP3Q9H4B8 488 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 TRPC7Q9HCX4 862 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 HPS4Q9NQG7 708 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 TRAF3IP3Q9Y228 551 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 SPTBN4Q9H254 2564 aa20.21■□□□□ 0.83
VARS-220ENST00000461874 FANCMQ8IYD8 2048 aa20.2■□□□□ 0.83
VARS-220ENST00000461874 ZNF292O60281 2723 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 A8MXQ7 604 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 TRIM66O15016 1216 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 LILRB5O75023 590 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 KIF20AO95235 890 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 VNN1O95497 513 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 TDGF1P13385 188 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 ANXA13P27216 316 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 CCR3P51677 355 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 DLG4P78352 724 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 FAM160A1Q05DH4 1040 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 RUNX3Q13761 415 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 PON2Q15165 354 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 ZNF699Q32M78 642 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 DGKKQ5KSL6 1271 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 CC2D1AQ6P1N0 951 aaPredicted RBP20.2■□□□□ 0.82
VARS-220ENST00000461874 DENND5BQ6ZUT9 1274 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 SPEM1Q8N4L4 309 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 TMC2Q8TDI7 906 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 EBF3Q9H4W6 596 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 SMYD3Q9H7B4 428 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 GDPD2Q9HCC8 539 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 RBM12Q9NTZ6 932 aaKnown RBP20.2■□□□□ 0.82
VARS-220ENST00000461874 GCNT4Q9P109 453 aa20.2■□□□□ 0.82
VARS-220ENST00000461874 F8VP50 259 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 CALUO43852 315 aaPredicted RBP20.19■□□□□ 0.82
VARS-220ENST00000461874 ZNF202O95125 648 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 USP17L7P0C7H9 530 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 CDH8P55286 799 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 USP46P62068 366 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 PPP2R5DQ14738 602 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 ZACNQ401N2 412 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 ZNF667Q5HYK9 610 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 CEP135Q66GS9 1140 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 TRIM68Q6AZZ1 485 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 B3GALNT2Q8NCR0 500 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 TTLL2Q9BWV7 592 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 B3GNT5Q9BYG0 378 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 EHD2Q9NZN4 543 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 FRMD4BQ9Y2L6 1034 aa20.19■□□□□ 0.82
VARS-220ENST00000461874 DENND4CQ5VZ89 1909 aa20.18■□□□□ 0.82
VARS-220ENST00000461874 C2orf78A6NCI8 922 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms