RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 ZBTB33Q86T24 672 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 PALM2Q8IXS6 379 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 NAT8LQ8N9F0 302 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 SHCBP1Q8NEM2 672 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 GDAP1Q8TB36 358 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ACTL9Q8TC94 416 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 DENND1AQ8TEH3 1009 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF526Q8TF50 670 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 MCRS1Q96EZ8 462 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 TMEM176AQ96HP8 235 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 RSRC1Q96IZ7 334 aaKnown RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 LRRC37BQ96QE4 947 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 TSPAN18Q96SJ8 248 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 MYCBPQ99417 103 aaPredicted RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ADPGKQ9BRR6 497 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 DHRS4Q9BTZ2 278 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 VPS11Q9H270 941 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 NOD2Q9HC29 1040 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 LRRC4CQ9HCJ2 640 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ARHGEF3Q9NR81 526 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 ABCF3Q9NUQ8 709 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 NOP53Q9NZM5 478 aaKnown RBP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 CTNNAL1Q9UBT7 734 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 TBK1Q9UHD2 729 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.27□□□□□ -0.93
HDAC3-202ENST00000459727 KIAA1217Q5T5P2 1943 aa9.27□□□□□ -0.93
HDAC3-202ENST00000459727 LRRC37A2A6NM11 1700 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 A0A0G2JLL6 359 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 FAM170AA1A519 330 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 C3orf70A6NLC5 250 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 POC1B-GALNT4F8VUJ3 575 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 PI4K2BG5E9Z4 385 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 INO80B-WBP1J3KQ70 363 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 CST8O60676 142 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 EDF1O60869 148 aaKnown RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 ATP2C2O75185 946 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 CILPO75339 1184 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 CST3P01034 146 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 LMNAP02545 664 aaKnown RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 SRGAP2CP0DJJ0 459 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 GPD1P21695 349 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 TNFSF9P41273 254 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 RAD23BP54727 409 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 EIF3EP60228 445 aaKnown RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 RBP5P82980 135 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 MBTD1Q05BQ5 628 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 INCA1Q0VD86 236 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 LAMC2Q13753 1193 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 VGLL4Q14135 290 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 DCAF4L1Q3SXM0 396 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 BOLA3Q53S33 107 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 SLC45A4Q5BKX6 768 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 DENND1BQ6P3S1 775 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 FASTKD5Q7L8L6 764 aaKnown RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 PRRT2Q7Z6L0 340 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 PHLDB2Q86SQ0 1253 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 CHSY1Q86X52 802 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 XYLT1Q86Y38 959 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 ERO1BQ86YB8 467 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 RFX6Q8HWS3 928 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 RAB3IL1Q8TBN0 382 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 RTP4Q96DX8 246 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 MTBPQ96DY7 904 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 SPATA33Q96N06 139 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 MMP19Q99542 508 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 SGIP1Q9BQI5 828 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 FERMT1Q9BQL6 677 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 INO80BQ9C086 356 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 KLC2Q9H0B6 622 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 CDT1Q9H211 546 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 LRMDAQ9H2I8 198 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 PLEKHA5Q9HAU0 1116 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 PNPLA8Q9NP80 782 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 CYLDQ9NQC7 956 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 SAR1AQ9NR31 198 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 BATF3Q9NR55 127 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 DNAJC17Q9NVM6 304 aaKnown RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 GEMIN8Q9NWZ8 242 aaKnown RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 BAIAP2L1Q9UHR4 511 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 ZNF180Q9UJW8 692 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 ZMYND8Q9ULU4 1186 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 BARX2Q9UMQ3 279 aaPredicted RBP9.26□□□□□ -0.93
HDAC3-202ENST00000459727 PHTF1Q9UMS5 762 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 USP18Q9UMW8 372 aa9.26□□□□□ -0.93
HDAC3-202ENST00000459727 DNAJC25-GNG10A0A024R161 153 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 GOLGA8SH3BPF8 625 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 C2CD2LO14523 706 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TRAFD1O14545 582 aaPredicted RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TRDMT1O14717 391 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TYROBPO43914 113 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 PRPSAP2O60256 369 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 KRT37O76014 449 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 MICAL2O94851 1124 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 ENDOD1O94919 500 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 LUC7L3O95232 432 aaKnown RBP9.25□□□□□ -0.93
HDAC3-202ENST00000459727 TGDSO95455 350 aa9.25□□□□□ -0.93
HDAC3-202ENST00000459727 INHBAP08476 426 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms