RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 NELFCDQ8IXH7 590 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 ARL14EPQ8N8R7 260 aaPredicted RBP17.18■□□□□ 0.34
GPC1-206ENST00000455111 SNX21Q969T3 373 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 FUBP3Q96I24 572 aaKnown RBP eCLIP17.18■□□□□ 0.34
GPC1-206ENST00000455111 ANKRD36BP1Q96IX9 119 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 LINC00597Q9H2U6 94 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 PCDHA7Q9UN72 937 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 WNT6Q9Y6F9 365 aa17.18■□□□□ 0.34
GPC1-206ENST00000455111 SOBPA7XYQ1 873 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 CHRM1P11229 460 aaPredicted RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 BDNFP23560 247 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 HOXA6P31267 233 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 RPL10AP62906 217 aaKnown RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 FAM160A1Q05DH4 1040 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 CYP24A1Q07973 514 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 SIM2Q14190 667 aaPredicted RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 MTF1Q14872 753 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 PSMD6Q15008 389 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 SNRNP35Q16560 246 aaKnown RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 BMT2Q1RMZ1 405 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 EML3Q32P44 896 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 LAIR1Q6GTX8 287 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 PRR23BQ6ZRT6 265 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 UNC13DQ70J99 1090 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 DPH6Q7L8W6 267 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 WDR5BQ86VZ2 330 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 SPATA2LQ8IUW3 424 aaPredicted RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 SYNPOQ8N3V7 929 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 MRPS31Q92665 395 aaKnown RBP17.17■□□□□ 0.34
GPC1-206ENST00000455111 PCED1BQ96HM7 432 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 CGRRF1Q99675 332 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 XYLT2Q9H1B5 865 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 CUEDC2Q9H467 287 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 KIF9Q9HAQ2 790 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 TRPC7Q9HCX4 862 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 CDH9Q9ULB4 789 aa17.17■□□□□ 0.34
GPC1-206ENST00000455111 MYOFQ9NZM1 2061 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 POLR2DO15514 142 aaKnown RBP17.16■□□□□ 0.34
GPC1-206ENST00000455111 GDF9O60383 454 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 RNF40O75150 1001 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 F13A1P00488 732 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 CYP2J2P51589 502 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 DUOXA2Q1HG44 320 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 FAM160A2Q8N612 972 aaPredicted RBP17.16■□□□□ 0.34
GPC1-206ENST00000455111 OSCP1Q8WVF1 389 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 SDCBP2Q9H190 292 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 ECT2Q9H8V3 914 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 SLC39A2Q9NP94 309 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 THG1LQ9NWX6 298 aaKnown RBP17.16■□□□□ 0.34
GPC1-206ENST00000455111 ZMYM5Q9UJ78 669 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 USP18Q9UMW8 372 aa17.16■□□□□ 0.34
GPC1-206ENST00000455111 DCDC2BA2VCK2 349 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 TNNC2P02585 160 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 RETP07949 1114 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 DLATP10515 647 aaKnown RBP17.15■□□□□ 0.34
GPC1-206ENST00000455111 PCSK1P29120 753 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 MYL6P60660 151 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 MESP2Q0VG99 397 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 MDH1BQ5I0G3 518 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 RESP18Q5W5W9 173 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 PAQR9Q6ZVX9 377 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 SFTPA1Q8IWL2 248 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 IQUBQ8NA54 791 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 KIAA0895Q8NCT3 520 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 MYCBPAPQ8TBZ2 947 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 SH3RF2Q8TEC5 729 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 CCDC127Q96BQ5 260 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 SPATA17Q96L03 361 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 ZNF396Q96N95 335 aaPredicted RBP17.15■□□□□ 0.34
GPC1-206ENST00000455111 TTLL2Q9BWV7 592 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 RXFP3Q9NSD7 469 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 SEMA4GQ9NTN9 838 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 MAGEC2Q9UBF1 373 aaPredicted RBP17.15■□□□□ 0.34
GPC1-206ENST00000455111 SPAG17Q6Q759 2223 aa17.15■□□□□ 0.34
GPC1-206ENST00000455111 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
GPC1-206ENST00000455111 CLDN5O00501 218 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 TACC1O75410 805 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 OLFM2O95897 454 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 ZSCAN22P10073 491 aaPredicted RBP17.14■□□□□ 0.33
GPC1-206ENST00000455111 TCF3P15923 654 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 AFMP43652 599 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 PPP2R5DQ14738 602 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 SURF1Q15526 300 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 B3GNT5Q9BYG0 378 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 ZNF518BQ9C0D4 1074 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 DUS2Q9NX74 493 aaKnown RBP17.14■□□□□ 0.33
GPC1-206ENST00000455111 UXTQ9UBK9 157 aaPredicted RBP17.14■□□□□ 0.33
GPC1-206ENST00000455111 SERTAD1Q9UHV2 236 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 GMEB2Q9UKD1 530 aa17.14■□□□□ 0.33
GPC1-206ENST00000455111 TRAV19A0A0A6YYK7 116 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 F8VP50 259 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 ACTN4O43707 911 aaKnown RBP17.13■□□□□ 0.33
GPC1-206ENST00000455111 VNN1O95497 513 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 STAU1O95793 577 aaKnown RBP17.13■□□□□ 0.33
GPC1-206ENST00000455111 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
GPC1-206ENST00000455111 OPRD1P41143 372 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms