RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 ACO1P21399 889 aaKnown RBP15.26■□□□□ 0.03
COL3A1-203ENST00000450867 GBP2P32456 591 aaPredicted RBP15.26■□□□□ 0.03
COL3A1-203ENST00000450867 GPR15P49685 360 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 RAD23BP54727 409 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 CYP27A1Q02318 531 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 ANO6Q4KMQ2 910 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 VWA3BQ502W6 1294 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 TRIM65Q6PJ69 517 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 POTEHQ6S545 545 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 GBP6Q6ZN66 633 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 SLC4A11Q8NBS3 891 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 SHKBP1Q8TBC3 707 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 TCEAL4Q96EI5 215 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 SMARCD1Q96GM5 515 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 TTLL2Q9BWV7 592 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 NAT10Q9H0A0 1025 aaKnown RBP15.26■□□□□ 0.03
COL3A1-203ENST00000450867 FANCLQ9NW38 375 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 IGSF9Q9P2J2 1179 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 CNTN6Q9UQ52 1028 aa15.26■□□□□ 0.03
COL3A1-203ENST00000450867 LRRC10BA6NIK2 292 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 SLC38A8A6NNN8 435 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 CLDN5O00501 218 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 F11P03951 625 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 SP100P23497 879 aaPredicted RBP15.25■□□□□ 0.03
COL3A1-203ENST00000450867 WEE1P30291 646 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 CDR1P51861 262 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 CACNA2D1P54289 1103 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 LRMPQ12912 555 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 ORC1Q13415 861 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 HTR4Q13639 388 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 EXOC3L4Q17RC7 722 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 ARHGAP17Q68EM7 881 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 PHLDB3Q6NSJ2 640 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 DPY19L2P1Q6NXN4 242 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 ENOSF1Q7L5Y1 443 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 TMEM150AQ86TG1 271 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 ARHGEF19Q8IW93 802 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 C12orf29Q8N999 325 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 GIPC2Q8TF65 315 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 KHSRPQ92945 711 aaKnown RBP eCLIP15.25■□□□□ 0.03
COL3A1-203ENST00000450867 TMEM176AQ96HP8 235 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 FAM81BQ96LP2 452 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 GPR88Q9GZN0 384 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 TRPV4Q9HBA0 871 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 UXTQ9UBK9 157 aaPredicted RBP15.25■□□□□ 0.03
COL3A1-203ENST00000450867 ZMYM5Q9UJ78 669 aa15.25■□□□□ 0.03
COL3A1-203ENST00000450867 SYCE3A1L190 88 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 F8VP50 259 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 PAEPP09466 180 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 MYL4P12829 197 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 CCDC130P13994 396 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 PON1P27169 355 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 CDC25CP30307 473 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 ZNF132P52740 706 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 KRT31Q15323 416 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 PTPN21Q16825 1174 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 SCN4BQ8IWT1 228 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 ZMIZ2Q8NF64 920 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 FAM200AQ8TCP9 573 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 GPR152Q8TDT2 470 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 KAT5Q92993 513 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 KREMEN1Q96MU8 473 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 PNPLA8Q9NP80 782 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 DMAP1Q9NPF5 467 aaPredicted RBP15.24■□□□□ 0.03
COL3A1-203ENST00000450867 IL37Q9NZH6 218 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 EHD2Q9NZN4 543 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 APEX2Q9UBZ4 518 aa15.24■□□□□ 0.03
COL3A1-203ENST00000450867 LIMA1Q9UHB6 759 aaKnown RBP15.24■□□□□ 0.03
COL3A1-203ENST00000450867 COL4A2P08572 1712 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 FAM92AA1XBS5 289 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 PI4K2BG5E9Z4 385 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 DLL1O00548 723 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 TNFRSF10BO14763 440 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 DCXO43602 365 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 TADA3O75528 432 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 CAVIN2O95810 425 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 SLC9A1P19634 815 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 ANXA13P27216 316 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 GABRR2P28476 465 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 GRIK1P39086 918 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 MTMR3Q13615 1198 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 IQCB1Q15051 598 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 SDHAF4Q5VUM1 108 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 DENND5BQ6ZUT9 1274 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 MTSS1LQ765P7 747 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
COL3A1-203ENST00000450867 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
COL3A1-203ENST00000450867 AOPEPQ8N6M6 819 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 ING5Q8WYH8 240 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 CYFIP2Q96F07 1278 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 SMOQ99835 787 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 CRACR2AQ9BSW2 395 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 KCNK12Q9HB15 430 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 KRT82Q9NSB4 513 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
COL3A1-203ENST00000450867 COMMD8Q9NX08 183 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms