RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 HMGCRP04035 888 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 ERBB2P04626 1255 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 IVLP07476 585 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 VDRP11473 427 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 RARGP13631 454 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 KRT10P13645 584 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 ATF7P17544 494 aaPredicted RBP16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 ITIH2P19823 946 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 PSMA2P25787 234 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 IVDP26440 423 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 SLC29A2Q14542 456 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 TRIP13Q15645 432 aaPredicted RBP16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 ODF2Q5BJF6 829 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 KAZNQ674X7 775 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 XYLT1Q86Y38 959 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 KLHDC9Q8NEP7 349 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 SNF8Q96H20 258 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 CALCOCO1Q9P1Z2 691 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 BCCIPQ9P287 314 aaKnown RBP eCLIP16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 WDR35Q9P2L0 1181 aa16.95■□□□□ 0.3
AP000253.1-201ENST00000449339 PIK3R2O00459 728 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 SPTLC1O15269 473 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 SHBGP04278 402 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 HPDP32754 393 aaPredicted RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 NKX3-2P78367 333 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 PDCLQ13371 301 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 CNGA2Q16280 664 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 CCSAPQ6IQ19 270 aaPredicted RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 JOSD2Q8TAC2 188 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 ZFP42Q96MM3 310 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 NT5C1AQ9BXI3 368 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 SENP6Q9GZR1 1112 aaPredicted RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 FAM124BQ9H5Z6 455 aaPredicted RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 LRRC4CQ9HCJ2 640 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 EIF3HO15372 352 aaKnown RBP eCLIP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 TJP3O95049 919 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 GPD2P43304 727 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 GSCP56915 257 aaPredicted RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 COPS2P61201 443 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 AGBL2Q5U5Z8 902 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 TTC39CQ8N584 583 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 FNIP1Q8TF40 1166 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 RAPGEF5Q92565 580 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 ACSF2Q96CM8 615 aaPredicted RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 DDX56Q9NY93 547 aaKnown RBP16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 CACNG4Q9UBN1 327 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 SRRDQ9UH36 339 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 NEU2Q9Y3R4 380 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 THSD7BQ9C0I4 1608 aa16.94■□□□□ 0.3
AP000253.1-201ENST00000449339 PIRO00625 290 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 ATF2P15336 505 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 KCNE1P15382 129 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 IGFBP6P24592 240 aaPredicted RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 ADCY8P40145 1251 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 THPOP40225 353 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 ZNF268Q14587 947 aaPredicted RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 PTGISQ16647 500 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 TFDP3Q5H9I0 405 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 ZNF618Q5T7W0 954 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 SPOCD1Q6ZMY3 1216 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 ZNF365Q70YC5 407 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 POLNQ7Z5Q5 900 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 RSPH3Q86UC2 560 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 CCDC25Q86WR0 208 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 LRRC52Q8N7C0 313 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 DPEP3Q9H4B8 488 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 AGO3Q9H9G7 860 aaKnown RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 METTL5Q9NRN9 209 aaKnown RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 FAM49BQ9NUQ9 324 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 TSPAN16Q9UKR8 245 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 LRRD1A4D1F6 860 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 PTGESO14684 152 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 RIPK2O43353 540 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 LRCH4O75427 683 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 GABRB2P47870 512 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 AFF1P51825 1210 aaKnown RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 GUCY1A3Q02108 690 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 MGAT3Q09327 533 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 PPP1R26Q5T8A7 1209 aaPredicted RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 RHBDF2Q6PJF5 856 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 HOOK3Q86VS8 718 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 EMC1Q8N766 993 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 CCDC89Q8N998 374 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 OR6B3Q8NGW1 331 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 LPPQ93052 612 aa16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 CWC15Q9P013 229 aaKnown RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 NOVA2Q9UNW9 492 aaKnown RBP16.93■□□□□ 0.3
AP000253.1-201ENST00000449339 hCG_1818297A0A087WSY0 165 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 PFKMP08237 780 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 FGFR1P11362 822 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 PTPN7P35236 360 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 CDKN2BP42772 138 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 VPS41P49754 854 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 ITGA8P53708 1063 aa16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 SLC25A11Q02978 314 aaKnown RBP16.92■□□□□ 0.3
AP000253.1-201ENST00000449339 SKIDA1Q1XH10 827 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms