RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 HSPA9P38646 679 aaKnown RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PPIL2Q13356 520 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 IFNEQ86WN2 208 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 ABHD10Q9NUJ1 306 aa11.62□□□□□ -0.55
SCN4A-201ENST00000435607 PPIEQ9UNP9 301 aaKnown RBP11.62□□□□□ -0.55
SCN4A-201ENST00000435607 ZC3H11AO75152 810 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 PRDX5P30044 214 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 PURAQ00577 322 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 C1DQ13901 141 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 TTC39BQ5VTQ0 682 aaPredicted RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ESRP1Q6NXG1 681 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 PEG10Q86TG7 708 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 RIN3Q8TB24 985 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 KLHL20Q9Y2M5 609 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 PCDHB9Q9Y5E1 797 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 GNG14A0A1W2PPG7 69 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 FGFR2P21802 821 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ACOT2P49753 483 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 LRRC8DQ7L1W4 858 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF589Q86UQ0 364 aaPredicted RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 RMND5BQ96G75 393 aaPredicted RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 THUMPD3Q9BV44 507 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 MYO5CQ9NQX4 1742 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 IGSF9BQ9UPX0 1349 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 KANSL1LA0AUZ9 987 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CYP7B1O75881 506 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 MTA2O94776 668 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ALBP02768 609 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 HNRNPCP07910 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 MSH3P20585 1137 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 FDFT1P37268 417 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 DDX39BQ13838 428 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 TCEA2Q15560 299 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 TRAF7Q6Q0C0 670 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 AGMOQ6ZNB7 445 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 SLC44A2Q8IWA5 706 aaPredicted RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 UNC45BQ8IWX7 931 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CNPY3Q9BT09 278 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CNPPD1Q9BV87 410 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 SLITRK2Q9H156 845 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 TMEM39AQ9NV64 488 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ARHGAP31Q2M1Z3 1444 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 A0A087WZ62 844 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 GMNCA6NCL1 334 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CYP27B1O15528 508 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 F9P00740 461 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 PABPC1P11940 636 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 BTKQ06187 659 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF280DQ6N043 979 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 MICU2Q8IYU8 434 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 VPS28Q9UK41 221 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 GRID1Q9ULK0 1009 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 METP08581 1390 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 RENBPP51606 427 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CENPCQ03188 943 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 PLEKHH3Q7Z736 793 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF248Q8NDW4 579 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 SERAC1Q96JX3 654 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 MCEEQ96PE7 176 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 TLR7Q9NYK1 1049 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ENTPD3O75355 529 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 ILF2Q12905 390 aaKnown RBP11.61□□□□□ -0.55
SCN4A-201ENST00000435607 CTXN3Q4LDR2 81 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 RAD54BQ9Y620 910 aa11.61□□□□□ -0.55
SCN4A-201ENST00000435607 MYL4P12829 197 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 ATP2C1P98194 919 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 STX4Q12846 297 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF211Q13398 564 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 BLOC1S5Q8TDH9 187 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 C1orf54Q8WWF1 131 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 STK39Q9UEW8 545 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 CYP26A1O43174 497 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 FEN1P39748 380 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 MCAMP43121 646 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 MMP14P50281 582 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 ZNF677Q86XU0 584 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 MAGEC3Q8TD91 643 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 DCP1AQ9NPI6 582 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 VTI1BQ9UEU0 232 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 AXIN2Q9Y2T1 843 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 AKAP5P24588 427 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 THOP1P52888 689 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 WDR36Q8NI36 951 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 USP7Q93009 1102 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 RANBP17Q9H2T7 1088 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 TRABDQ9H4I3 376 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 TLR8Q9NR97 1041 aaKnown RBP11.6□□□□□ -0.55
SCN4A-201ENST00000435607 TMEM51Q9NW97 253 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 TRPC4Q9UBN4 977 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 GCC2Q8IWJ2 1684 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 RHOCP08134 193 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 CYP2D6P10635 497 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 EPHB2P29323 1055 aa11.6□□□□□ -0.55
SCN4A-201ENST00000435607 IL2P60568 153 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms