RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 VTI1AQ96AJ9 217 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 FAM81BQ96LP2 452 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 PGLYRP2Q96PD5 576 aa13.08□□□□□ -0.32
CDH3-202ENST00000429102 NGRNQ9NPE2 291 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 MRPL42Q9Y6G3 142 aaKnown RBP13.08□□□□□ -0.32
CDH3-202ENST00000429102 CCDC160A6NGH7 325 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 NVLO15381 856 aaKnown RBP13.07□□□□□ -0.32
CDH3-202ENST00000429102 TMEM191BP0C7N4 346 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 GNAT1P11488 350 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 ATP4AP20648 1035 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 PGM1P36871 562 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 CNTN2Q02246 1040 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 MYBPC2Q14324 1141 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 C15orf59Q2T9L4 293 aaPredicted RBP13.07□□□□□ -0.32
CDH3-202ENST00000429102 ACSBG2Q5FVE4 666 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 C16orf46Q6P387 395 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 RSPH3Q86UC2 560 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 KATNAL2Q8IYT4 538 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 AGGF1Q8N302 714 aaeCLIP13.07□□□□□ -0.32
CDH3-202ENST00000429102 CPT1BQ92523 772 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 GRAMD1AQ96CP6 724 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 TSC22D3Q99576 134 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 NMUR2Q9GZQ4 415 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
CDH3-202ENST00000429102 PCMTD2Q9NV79 361 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 NMRK1Q9NWW6 199 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 STARD13Q9Y3M8 1113 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 SCINQ9Y6U3 715 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 E5RJQ4 531 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 PSTPIP1O43586 416 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 SMNDC1O75940 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH3-202ENST00000429102 C4BPAP04003 597 aaKnown RBP13.07□□□□□ -0.32
CDH3-202ENST00000429102 LINGO3P0C6S8 592 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 AMPD1P23109 780 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 CALRP27797 417 aaKnown RBP13.07□□□□□ -0.32
CDH3-202ENST00000429102 CDH6P55285 790 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 SLC8A3P57103 927 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 AP1ARQ63HQ0 302 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 TMEM35BQ8NCS4 154 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 TRIM11Q96F44 468 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 COQ4Q9Y3A0 265 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 CCDC78A2IDD5 438 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 STK10O94804 968 aaKnown RBP13.07□□□□□ -0.32
CDH3-202ENST00000429102 HSD17B4P51659 736 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 JAK3P52333 1124 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 CDHR3Q6ZTQ4 885 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 TMC2Q8TDI7 906 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 RABGEF1Q9UJ41 708 aa13.07□□□□□ -0.32
CDH3-202ENST00000429102 CCDC189A1A4V9 331 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 PSAPP07602 524 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 ACO1P21399 889 aaKnown RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 PHBP35232 272 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 YARSP54577 528 aaKnown RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 SP2Q02086 613 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 LMNB2Q03252 620 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 MOGSQ13724 837 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 RNASEH2BQ5TBB1 312 aaKnown RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 SYDE1Q6ZW31 735 aaPredicted RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 CCNJLQ8IV13 435 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 KIAA0319LQ8IZA0 1049 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 ATP11CQ8NB49 1132 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 MAGEB5Q9BZ81 275 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 LRMDAQ9H2I8 198 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 hCG_1818297A0A087WSY0 165 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 COPEO14579 308 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 ZMPSTE24O75844 475 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 DGAT1O75907 488 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 PTPN4P29074 926 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 CFAP157Q5JU67 520 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 RSBN1LQ6PCB5 846 aaPredicted RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 POLNQ7Z5Q5 900 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 RNF149Q8NC42 400 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 TEKT4Q8WW24 435 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 APOL6Q9BWW8 343 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 TMEM191CA6NGB0 347 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 FCHO1O14526 889 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 KCNN4O15554 427 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 CCNB1P14635 433 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 PTGER2P43116 358 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 PHKA2P46019 1235 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 OR6B2Q6IFH4 312 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 UNC5BQ8IZJ1 945 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 DENND1AQ8TEH3 1009 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 AVENQ9NQS1 362 aaPredicted RBP13.06□□□□□ -0.32
CDH3-202ENST00000429102 LGALS13Q9UHV8 139 aa13.06□□□□□ -0.32
CDH3-202ENST00000429102 hCG_2014768A0A024R1R8 64 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 WNT10BO00744 389 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 TBX10O75333 385 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 ABCG1P45844 678 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 KLC1Q07866 573 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 CHI3L2Q15782 390 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 ZNF699Q32M78 642 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 FAM102AQ5T9C2 384 aaPredicted RBP13.05□□□□□ -0.32
CDH3-202ENST00000429102 MIS12Q9H081 205 aa13.05□□□□□ -0.32
CDH3-202ENST00000429102 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.05□□□□□ -0.32
CDH3-202ENST00000429102 RGL2O15211 777 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms