RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 SMOQ99835 787 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 MIS12Q9H081 205 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 THAP2Q9H0W7 228 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 MSRAQ9UJ68 235 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 CCDC172P0C7W6 258 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 NDUFV1P49821 464 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 BPIFB4P59827 614 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 DSG1Q02413 1049 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 ELAVL2Q12926 359 aaKnown RBP14.23□□□□□ -0.13
PRPF39-202ENST00000424478 GPM6BQ13491 265 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 CLEC16AQ2KHT3 1053 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 PTPN20Q4JDL3 420 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 CCDC112Q8NEF3 446 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 ZMIZ2Q8NF64 920 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 ZCWPW1Q9H0M4 648 aa14.23□□□□□ -0.13
PRPF39-202ENST00000424478 MRPL17Q9NRX2 175 aaKnown RBP14.23□□□□□ -0.13
PRPF39-202ENST00000424478 SSU72P8A0A1W2PR75 194 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 F8VP50 259 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 LCP1P13796 627 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GTF2F1P35269 517 aaKnown RBP eCLIP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GPD2P43304 727 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 CNGA2Q16280 664 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 FAM171BQ6P995 826 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 FAM43BQ6ZT52 329 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 CLEC20AQ6ZU45 233 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 ANKS3Q6ZW76 656 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 SPATA2LQ8IUW3 424 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 PIK3R5Q8WYR1 880 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 TRIM7Q9C029 511 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 PRO3102Q9H379 93 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GOLPH3Q9H4A6 298 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 SALL4Q9UJQ4 1053 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 PCDHA13Q9Y5I0 950 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 TBC1D4O60343 1298 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GRAP2O75791 330 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 SEC24AO95486 1093 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 UNGP13051 313 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 CYLC1P35663 651 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 MAGEA1P43355 309 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GALCP54803 685 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 CDK17Q00537 523 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 BMS1Q14692 1282 aaKnown RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 LCLAT1Q6UWP7 414 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 ADGRD2Q7Z7M1 963 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 TIFAQ96CG3 184 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 HERC2P3Q9BVR0 1158 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 MTRRQ9UBK8 725 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 PPP2R2CQ9Y2T4 447 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 PAXBP1Q9Y5B6 917 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 BZW2Q9Y6E2 419 aaKnown RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 MTMR11A4FU01 709 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GOLGA8SH3BPF8 625 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 SOX1O00570 391 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-202ENST00000424478 MTMR3Q13615 1198 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 TAF5Q15542 800 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 MGAT5BQ3V5L5 792 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 SCUBE3Q8IX30 993 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 SCAMP5Q8TAC9 235 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 GIPC2Q8TF65 315 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 FAXDC2Q96IV6 333 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 HESX1Q9UBX0 185 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 BRWD1Q9NSI6 2320 aa14.22□□□□□ -0.13
PRPF39-202ENST00000424478 E5RJQ4 531 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 ERBB2P04626 1255 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 CYP1A1P04798 512 aaPredicted RBP14.21□□□□□ -0.13
PRPF39-202ENST00000424478 GRIK1P39086 918 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 PLCB3Q01970 1234 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 SPA17Q15506 151 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 KIAA1328Q86T90 577 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 PIGZQ86VD9 579 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 VPS36Q86VN1 386 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 LRCH3Q96II8 777 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 BTBD6Q96KE9 485 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 TLR9Q9NR96 1032 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 DAAM1Q9Y4D1 1078 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.21□□□□□ -0.13
PRPF39-202ENST00000424478 PTPRDP23468 1912 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.13
PRPF39-202ENST00000424478 MACROD2A1Z1Q3 448 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 BUB1O43683 1085 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 CTSAP10619 480 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 RRM1P23921 792 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 BMP8BP34820 402 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 PDCLQ13371 301 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 DAB2IPQ5VWQ8 1189 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 HNRNPABQ99729 332 aaKnown RBP14.21□□□□□ -0.14
PRPF39-202ENST00000424478 OSGEPQ9NPF4 335 aa14.21□□□□□ -0.14
PRPF39-202ENST00000424478 EIF3CLB5ME19 914 aaKnown RBP14.2□□□□□ -0.14
PRPF39-202ENST00000424478 MED7O43513 233 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 FAM200BP0CF97 657 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 NSFP46459 744 aaKnown RBP14.2□□□□□ -0.14
PRPF39-202ENST00000424478 RNASE9P60153 205 aaKnown RBP14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ERVK-21P61565 698 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 PKDCCQ504Y2 493 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 ZNF697Q5TEC3 545 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 CPNE8Q86YQ8 564 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 EIF3CQ99613 913 aaKnown RBP14.2□□□□□ -0.14
PRPF39-202ENST00000424478 SYNCQ9H7C4 482 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 PLXNA3P51805 1871 aa14.2□□□□□ -0.14
PRPF39-202ENST00000424478 NPR3P17342 541 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms