RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ANO9A1A5B4 782 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 LAD1O00515 517 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ENC1O14682 589 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 TERTO14746 1132 aaKnown RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ZBTB39O15060 712 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ADAMTS3O15072 1205 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 DKK1O94907 266 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 LDOC1O95751 146 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 AFPP02771 609 aaKnown RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 CDK4P11802 303 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 CR2P20023 1033 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 GLDCP23378 1020 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ARL2P36404 184 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 OPRD1P41143 372 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 TNFSF9P41273 254 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 CCT8P50990 548 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 NLRP12P59046 1061 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 RTP5Q14D33 572 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ATF7IP2Q5U623 682 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 EEF1DP3Q658K8 133 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ADAT2Q7Z6V5 191 aaKnown RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 MON1AQ86VX9 555 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ERICH1Q86X53 443 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 SH3RF2Q8TEC5 729 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 TTC9Q92623 222 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ZNF419Q96HQ0 510 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 TCHPQ9BT92 498 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 MTA3Q9BTC8 594 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 GPR174Q9BXC1 333 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 C22orf23Q9BZE7 217 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 LINC00597Q9H2U6 94 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 TTC12Q9H892 705 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 RPF1Q9H9Y2 349 aaKnown RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ZSWIM6Q9HCJ5 1215 aa6.86□□□□□ -1.31
SDCBP-203ENST00000424270 ABI2Q9NYB9 513 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 WRAP73Q9P2S5 460 aaPredicted RBP6.86□□□□□ -1.31
SDCBP-203ENST00000424270 BLACEA4D250 179 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ACKR2O00590 384 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 KCNK3O14649 394 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ADAM23O75077 832 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 LARGE1O95461 756 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 VNN2O95498 520 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 HOXB1P14653 301 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ATF6P18850 670 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 NDUFV2P19404 249 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ATP2B1P20020 1258 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ABCB4P21439 1286 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CD6P30203 668 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 GRIA2P42262 883 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 AFMP43652 599 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 SLC6A11P48066 632 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CSNK1EP49674 416 aaKnown RBP6.85□□□□□ -1.31
SDCBP-203ENST00000424270 TLE1Q04724 770 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 DNAJC3Q13217 504 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 MYBPC2Q14324 1141 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ZNF268Q14587 947 aaPredicted RBP6.85□□□□□ -1.31
SDCBP-203ENST00000424270 EPHA7Q15375 998 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ZNF77Q15935 545 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 PTPRNQ16849 979 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 ZNF568Q3ZCX4 644 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 SGO2Q562F6 1265 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 C10orf76Q5T2E6 689 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 DCAF12L1Q5VU92 463 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 BTBD8Q5XKL5 378 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 APOA5Q6Q788 366 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 KDM7AQ6ZMT4 941 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CCDC81Q6ZN84 652 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 SFTPA1Q8IWL2 248 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CHPFQ8IZ52 775 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 FSIP1Q8NA03 581 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 BEST2Q8NFU1 509 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 RIN3Q8TB24 985 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CNDP2Q96KP4 475 aaKnown RBP6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CYP2S1Q96SQ9 504 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 IL21Q9HBE4 155 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 EIF2B4Q9UI10 523 aaKnown RBP6.85□□□□□ -1.31
SDCBP-203ENST00000424270 RCAN3Q9UKA8 241 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 CLCA2Q9UQC9 943 aa6.85□□□□□ -1.31
SDCBP-203ENST00000424270 NID2Q14112 1375 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 KLF18A0A0U1RQI7 1052 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 CCDC196A0A1B0GTZ2 297 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 E2F8A0AVK6 867 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 SCAMP3O14828 347 aaKnown RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 OAZ2O95190 189 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 ADH1CP00326 375 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 ITGAVP06756 1048 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 ODC1P11926 461 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 NTSR1P30989 418 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 TNFRSF4P43489 277 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 AFF3P51826 1226 aaKnown RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 PPP2R5CQ13362 524 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 FAM187BQ17R55 369 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 KIF19Q2TAC6 998 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 ZSCAN23Q3MJ62 389 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 HIST2H2BCQ6DN03 193 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 METTL23Q86XA0 190 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 NAT16Q8N8M0 369 aa6.84□□□□□ -1.31
SDCBP-203ENST00000424270 ARL14EPQ8N8R7 260 aaPredicted RBP6.84□□□□□ -1.31
SDCBP-203ENST00000424270 STKLD1Q8NE28 680 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms