RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 ABHD16BQ9H3Z7 469 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 SH2D4AQ9H788 454 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 SAE1Q9UBE0 346 aaPredicted RBP5.83□□□□□ -1.48
SFXN1-202ENST00000421887 MUTYHQ9UIF7 546 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 CHD7Q9P2D1 2997 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 KMT2EQ8IZD2 1858 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 CHD9Q3L8U1 2897 aa5.83□□□□□ -1.48
SFXN1-202ENST00000421887 CACNA1BQ00975 2339 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 IL16Q14005 1332 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 FANCIQ9NVI1 1328 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 TRAV20A0A0B4J274 112 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 A0A1B0GUL7 405 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 TMEM221A6NGB7 291 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 ZNF561-AS1K7EIQ3 104 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 M0R296 226 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 KRT37O76014 449 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 BAIAP3O94812 1187 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 IPO13O94829 963 aaKnown RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 SCAF4O95104 1147 aaKnown RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 ATP2B1P20020 1258 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 RFC2P35250 354 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 DNM2P50570 870 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 EXOSC9Q06265 439 aaKnown RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 PLEKHG4Q58EX7 1191 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 HERC4Q5GLZ8 1057 aaPredicted RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 TATDN1Q6P1N9 297 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 SLC43A3Q8NBI5 491 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 NEK9Q8TD19 979 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 TGS1Q96RS0 853 aaKnown RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 TRPV6Q9H1D0 765 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 UPF3AQ9H1J1 476 aaKnown RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 SMURF1Q9HCE7 757 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 NCDNQ9UBB6 729 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 PARP14Q460N5 1801 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 CFAP54Q96N23 3096 aa5.82□□□□□ -1.48
SFXN1-202ENST00000421887 TRIP12Q14669 1992 aaPredicted RBP5.82□□□□□ -1.48
SFXN1-202ENST00000421887 AQP7O14520 342 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 WNT9AO14904 365 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 GSTA4O15217 222 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 SNAI1O95863 264 aaPredicted RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 RFX5P48382 616 aaPredicted RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 ADAM8P78325 824 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 BEX3Q00994 111 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 TNFAIP2Q03169 654 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 TMEM132BQ14DG7 1078 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 SEPT2Q15019 361 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 FSCN1Q16658 493 aaKnown RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 HTR3DQ70Z44 454 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 SPICE1Q8N0Z3 855 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 ZNF384Q8TF68 577 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 ERCC4Q92889 916 aaPredicted RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 PABPC5Q96DU9 382 aaKnown RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 ZNF512Q96ME7 567 aaPredicted RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 HMG20BQ9P0W2 317 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 TESQ9UGI8 421 aaKnown RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 SFMBT1Q9UHJ3 866 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 HDAC5Q9UQL6 1122 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 R3HCC1Q9Y3T6 440 aaKnown RBP5.81□□□□□ -1.48
SFXN1-202ENST00000421887 TECTAO75443 2155 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 USP34Q70CQ2 3546 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 PLXNA3P51805 1871 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 TANC1Q9C0D5 1861 aa5.81□□□□□ -1.48
SFXN1-202ENST00000421887 SPTBN4Q9H254 2564 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 PTPRSQ13332 1948 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 TRANK1O15050 2925 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 CCDC66A2RUB6 948 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 WDR46O15213 610 aaKnown RBP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 FOXP2O15409 715 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 NCK2O43639 380 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 RECQL4O94761 1208 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 UQCRFS1P1P0C7P4 283 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 CYP2C9P11712 490 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 LAG3P18627 525 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 HK1P19367 917 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 GTF2F1P35269 517 aaKnown RBP eCLIP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 PSMC6P62333 389 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 GUCY1A3Q02108 690 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 BFSP2Q13515 415 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 FAM47CQ5HY64 1035 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 Q6YL49 198 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 DGLUCYQ7Z3D6 616 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 TLK2Q86UE8 772 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 CXorf67Q86X51 503 aaPredicted RBP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 CERS3Q8IU89 383 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 MDGA1Q8NFP4 955 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 NKD2Q969F2 451 aaPredicted RBP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 MRPL38Q96DV4 380 aaKnown RBP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 C16orf92Q96LL3 132 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 DNAJC2Q99543 621 aaKnown RBP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 FSD1Q9BTV5 496 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 USP44Q9H0E7 712 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 ALDH8A1Q9H2A2 487 aaPredicted RBP5.8□□□□□ -1.48
SFXN1-202ENST00000421887 PRDM13Q9H4Q3 707 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 ASB1Q9Y576 335 aa5.8□□□□□ -1.48
SFXN1-202ENST00000421887 MYO5AQ9Y4I1 1855 aaKnown RBP5.79□□□□□ -1.48
SFXN1-202ENST00000421887 TNKSO95271 1327 aa5.79□□□□□ -1.48
SFXN1-202ENST00000421887 CENPVL1A0A0U1RR11 272 aa5.79□□□□□ -1.48
SFXN1-202ENST00000421887 A0A1W2PRG0 241 aa5.79□□□□□ -1.48
SFXN1-202ENST00000421887 LCHNA4D1U4 455 aa5.79□□□□□ -1.48
SFXN1-202ENST00000421887 PRR23AA6NEV1 266 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms