RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 FBXW11Q9UKB1 542 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 HCFC2Q9Y5Z7 792 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 MTCH2Q9Y6C9 303 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 ATP8B3O60423 1300 aa16.65■□□□□ 0.26
DDX55-203ENST00000421670 MED7O43513 233 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 AP1G2O75843 785 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 BEST1O76090 585 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 FAM200BP0CF97 657 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 FMO1Q01740 532 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 CDR2Q01850 454 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SMARCB1Q12824 385 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 CNGA2Q16280 664 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 TSR1Q2NL82 804 aaKnown RBP16.64■□□□□ 0.25
DDX55-203ENST00000421670 MGAT5BQ3V5L5 792 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 LCLAT1Q6UWP7 414 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 CCDC186Q7Z3E2 898 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 ZNF571Q7Z3V5 609 aaPredicted RBP16.64■□□□□ 0.25
DDX55-203ENST00000421670 OLIG1Q8TAK6 271 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 UBA3Q8TBC4 463 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
DDX55-203ENST00000421670 FUBP3Q96I24 572 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDX55-203ENST00000421670 PDLIM2Q96JY6 352 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 GAS2L1Q99501 681 aaPredicted RBP16.64■□□□□ 0.25
DDX55-203ENST00000421670 IGFLR1Q9H665 355 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 MAN1C1Q9NR34 630 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 COL6A3P12111 3177 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 DOCK6Q96HP0 2047 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 PRRG1O14668 218 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SERPING1P05155 500 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 NPR3P17342 541 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 GPR15P49685 360 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 MAP3K7CLP57077 242 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 HYAL1Q12794 435 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 STILQ15468 1287 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 MEA1Q16626 185 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 GPR153Q6NV75 609 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 DENND1BQ6P3S1 775 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 CLEC20AQ6ZU45 233 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 MICALL1Q8N3F8 863 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 DEFB123Q8N688 67 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 KREMEN2Q8NCW0 462 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 STKLD1Q8NE28 680 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 VN1R2Q8NFZ6 395 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SLC7A14Q8TBB6 771 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SLC22A17Q8WUG5 538 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 MYLIPQ8WY64 445 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 PPP2R3CQ969Q6 453 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 KCNK16Q96T55 309 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 CHP1Q99653 195 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SMOQ99835 787 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SYT11Q9BT88 431 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 PDCL3Q9H2J4 239 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 ABCB6Q9NP58 842 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 SEPT11Q9NVA2 429 aaKnown RBP16.64■□□□□ 0.25
DDX55-203ENST00000421670 ZNHIT6Q9NWK9 470 aaKnown RBP16.64■□□□□ 0.25
DDX55-203ENST00000421670 LMCD1Q9NZU5 365 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 HESX1Q9UBX0 185 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 OBSL1O75147 1896 aa16.64■□□□□ 0.25
DDX55-203ENST00000421670 BRWD1Q9NSI6 2320 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 F8VP50 259 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 TULP2O00295 520 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 ELF1P32519 619 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 GRIK1P39086 918 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 BCAT1P54687 386 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 DDR2Q16832 855 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 PKDCCQ504Y2 493 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 SDHAF4Q5VUM1 108 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 ZNF677Q86XU0 584 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 SCN4BQ8IWT1 228 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 ANKRD52Q8NB46 1076 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 SECISBP2LQ93073 1101 aaKnown RBP16.63■□□□□ 0.25
DDX55-203ENST00000421670 PANX2Q96RD6 677 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 AGPAT1Q99943 283 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 DUSP16Q9BY84 665 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 DMAP1Q9NPF5 467 aaPredicted RBP16.63■□□□□ 0.25
DDX55-203ENST00000421670 PCDHGC3Q9UN70 934 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 YIPF1Q9Y548 306 aa16.63■□□□□ 0.25
DDX55-203ENST00000421670 LINC01565O15544 149 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 C8AP07357 584 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 HAPLN1P10915 354 aaPredicted RBP16.62■□□□□ 0.25
DDX55-203ENST00000421670 ATF6P18850 670 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 MAGEA11P43364 429 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 GSDMDP57764 484 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 PDE4CQ08493 712 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 BST2Q10589 180 aaKnown RBP16.62■□□□□ 0.25
DDX55-203ENST00000421670 VSTM1Q6UX27 236 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 TCEAL8Q8IYN2 117 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 C1orf131Q8NDD1 294 aaKnown RBP16.62■□□□□ 0.25
DDX55-203ENST00000421670 ZMIZ2Q8NF64 920 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 GPR152Q8TDT2 470 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 CDX2Q99626 313 aaPredicted RBP16.62■□□□□ 0.25
DDX55-203ENST00000421670 CYTH4Q9UIA0 394 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 INSL5Q9Y5Q6 135 aa16.62■□□□□ 0.25
DDX55-203ENST00000421670 GLP2RO95838 553 aa16.61■□□□□ 0.25
DDX55-203ENST00000421670 POU3F3P20264 500 aaPredicted RBP16.61■□□□□ 0.25
DDX55-203ENST00000421670 EIF4A3P38919 411 aaKnown RBP16.61■□□□□ 0.25
DDX55-203ENST00000421670 LIN9Q5TKA1 542 aa16.61■□□□□ 0.25
DDX55-203ENST00000421670 PCDHB18PQ96TA0 734 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms