RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 UXTQ9UBK9 157 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-206ENST00000420746 USP20Q9Y2K6 914 aa9.78□□□□□ -0.84
TRIM39-206ENST00000420746 TIMM13Q9Y5L4 95 aaPredicted RBP9.78□□□□□ -0.84
TRIM39-206ENST00000420746 NOTCH2Q04721 2471 aa9.78□□□□□ -0.84
TRIM39-206ENST00000420746 STK36Q9NRP7 1315 aa9.78□□□□□ -0.84
TRIM39-206ENST00000420746 TRAV19A0A0A6YYK7 116 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-206ENST00000420746 ZBTB24O43167 697 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-206ENST00000420746 PCDHGA12O60330 932 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 NDUFS2O75306 463 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 C1SP09871 688 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 CSH1P0DML2 217 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 CSH2P0DML3 217 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 HSPA4P34932 840 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 MYO1EQ12965 1108 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 NECTIN1Q15223 517 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 INAVAQ3KP66 663 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 TBC1D25Q3MII6 688 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 TTC22Q5TAA0 569 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 CREB3L3Q68CJ9 461 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 PADI6Q6TGC4 694 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 PRICKLE2Q7Z3G6 844 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 ERICH1Q86X53 443 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 SLFN12Q8IYM2 578 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 BLIDQ8IZY5 108 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 NAP1L4Q99733 375 aaKnown RBP9.77□□□□□ -0.85
TRIM39-206ENST00000420746 TTC12Q9H892 705 aaPredicted RBP9.77□□□□□ -0.85
TRIM39-206ENST00000420746 PTPRHQ9HD43 1115 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 ARHGAP26Q9UNA1 814 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 BTBD3Q9Y2F9 522 aa9.77□□□□□ -0.85
TRIM39-206ENST00000420746 FLNCQ14315 2725 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 KNTC1P50748 2209 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CEP192Q8TEP8 1941 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 TADA3O75528 432 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 KRT38O76015 456 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CKMP06732 381 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 MCF2P10911 925 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 HAPLN1P10915 354 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-206ENST00000420746 ATP2B1P20020 1258 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CYP3A5P20815 502 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CCR10P46092 362 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 PDE6CP51160 858 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CCDC173Q0VFZ6 552 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 DMP1Q13316 513 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-206ENST00000420746 INF2Q27J81 1249 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 ZNF568Q3ZCX4 644 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 SLC39A12Q504Y0 691 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 NEK8Q86SG6 692 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CACTIN-AS1Q8N1I8 211 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 ZNF248Q8NDW4 579 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CADM4Q8NFZ8 388 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 SH3RF2Q8TEC5 729 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 GIPC2Q8TF65 315 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 TRMT2BQ96GJ1 504 aaKnown RBP9.76□□□□□ -0.85
TRIM39-206ENST00000420746 ZCWPW1Q9H0M4 648 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 LINC00597Q9H2U6 94 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 CYP8B1Q9UNU6 501 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.76□□□□□ -0.85
TRIM39-206ENST00000420746 HEMK1Q9Y5R4 338 aaPredicted RBP9.76□□□□□ -0.85
TRIM39-206ENST00000420746 RELNP78509 3460 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 PHLPP2Q6ZVD8 1323 aa9.76□□□□□ -0.85
TRIM39-206ENST00000420746 TRIP11Q15643 1979 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 DOPEY2Q9Y3R5 2298 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 ANK1P16157 1881 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 LRRK2Q5S007 2527 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 MEI4A8MW99 385 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 BCAT2O15382 392 aaPredicted RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 PAPSS1O43252 624 aaPredicted RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 BRINP1O60477 761 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 BAG4O95429 457 aaKnown RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 CYP17A1P05093 508 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 CYP11A1P05108 521 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 ODC1P11926 461 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 HOXB2P14652 356 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 IFNAR1P17181 557 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 PFKLP17858 780 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 LIG1P18858 919 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 NDUFV2P19404 249 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 MAOBP27338 520 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 OSTNP61366 133 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 BNC1Q01954 994 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 RESTQ13127 1097 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 TARDBPQ13148 414 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 NTRK3Q16288 839 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 EMC10Q5UCC4 262 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 DSTYKQ6XUX3 929 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 MAEAQ7L5Y9 396 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 SFTPA1Q8IWL2 248 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 ZCCHC9Q8N567 271 aaKnown RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 OR10T2Q8NGX3 314 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 PIGOQ8TEQ8 1089 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 MYRFLQ96LU7 910 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 LGMNQ99538 433 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 ACO2Q99798 780 aaKnown RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 LSG1Q9H089 658 aaKnown RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 RWDD1Q9H446 243 aaPredicted RBP9.75□□□□□ -0.85
TRIM39-206ENST00000420746 CD248Q9HCU0 757 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 ARHGEF4Q9NR80 690 aa9.75□□□□□ -0.85
TRIM39-206ENST00000420746 KCNK4Q9NYG8 393 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms