RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 TMEM8BA6NDV4 472 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 ALDH1A2O94788 518 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 SEC24BO95487 1268 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 KRT19P08727 400 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 CEACAM1P13688 526 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 HDCP19113 662 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 PCSK1P29120 753 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 UAP1L1Q3KQV9 507 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 C2orf27AQ580R0 203 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 PDCL2Q8N4E4 241 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 ARL14EPQ8N8R7 260 aaPredicted RBP10.76□□□□□ -0.69
MDC1-202ENST00000416571 SH3RF2Q8TEC5 729 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 NOC3LQ8WTT2 800 aaKnown RBP10.76□□□□□ -0.69
MDC1-202ENST00000416571 EZH1Q92800 747 aaPredicted RBP10.76□□□□□ -0.69
MDC1-202ENST00000416571 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 SPACA7Q96KW9 195 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 CNOT6LQ96LI5 555 aaKnown RBP10.76□□□□□ -0.69
MDC1-202ENST00000416571 MYRFLQ96LU7 910 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 FIZ1Q96SL8 496 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 FAM213AQ9BRX8 229 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 ST6GALNAC4Q9H4F1 302 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 BLOC1S4Q9NUP1 217 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 L1RE1Q9UN81 338 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 EXOC7Q9UPT5 735 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 STYXL1Q9Y6J8 313 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 ANAPC1Q9H1A4 1944 aa10.76□□□□□ -0.69
MDC1-202ENST00000416571 C2orf78A6NCI8 922 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 PATE3B3GLJ2 98 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 MAP3K13O43283 966 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 BMP15O95972 392 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 LDHAP00338 332 aaKnown RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 SPINK2P20155 84 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 CSRP1P21291 193 aaKnown RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 LONP1P36776 959 aaKnown RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 LHX1P48742 406 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 LMAN2Q12907 356 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 CFAP221Q4G0U5 840 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 LMBRD2Q68DH5 695 aaPredicted RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 CRELD2Q6UXH1 353 aaPredicted RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 C4orf50Q6ZRC1 276 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 SFR1Q86XK3 245 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 ADGRF2Q8IZF7 708 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 CCDC33Q8N5R6 958 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 CSGALNACT2Q8N6G5 542 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 LRRC52Q8N7C0 313 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 SPATA18Q8TC71 538 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 USP33Q8TEY7 942 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 PIGKQ92643 395 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 FUBP3Q96I24 572 aaKnown RBP eCLIP10.75□□□□□ -0.69
MDC1-202ENST00000416571 SLC22A12Q96S37 553 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 SCNM1Q9BWG6 230 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 NUSAP1Q9BXS6 441 aaKnown RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 SLC32A1Q9H598 525 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 MRPL44Q9H9J2 332 aaKnown RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 RBAKQ9NYW8 714 aaPredicted RBP10.75□□□□□ -0.69
MDC1-202ENST00000416571 BCCIPQ9P287 314 aaKnown RBP eCLIP10.75□□□□□ -0.69
MDC1-202ENST00000416571 ITGA11Q9UKX5 1188 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 MMP17Q9ULZ9 603 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 SNX9Q9Y5X1 595 aa10.75□□□□□ -0.69
MDC1-202ENST00000416571 FRYQ5TBA9 3013 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 MYMKA6NI61 221 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 TMEM191BP0C7N4 346 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 TCF3P15923 654 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 BCKDHBP21953 392 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 ANXA13P27216 316 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 GJB2P29033 226 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 DDIT3P35638 169 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 MRPS21P82921 87 aaKnown RBP10.74□□□□□ -0.69
MDC1-202ENST00000416571 RBP5P82980 135 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 MYO1EQ12965 1108 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 CRY1Q16526 586 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 TRIM61Q5EBN2 209 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 LPCAT2Q7L5N7 544 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 DYMQ7RTS9 669 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 ZNF720Q7Z2F6 126 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 RASSF3Q86WH2 238 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 BRSK2Q8IWQ3 736 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 SYCP3Q8IZU3 236 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 ABCA7Q8IZY2 2146 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 TOP6BLQ8N6T0 577 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 C1orf127Q8N9H9 656 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 KDF1Q8NAX2 398 aaPredicted RBP10.74□□□□□ -0.69
MDC1-202ENST00000416571 DEFB124Q8NES8 71 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 MDGA1Q8NFP4 955 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 WHAMMQ8TF30 809 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 LRRC15Q8TF66 581 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 SAAL1Q96ER3 474 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 ACCSQ96QU6 501 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 LINC00597Q9H2U6 94 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 POLMQ9NP87 494 aaPredicted RBP10.74□□□□□ -0.69
MDC1-202ENST00000416571 PPP4R2Q9NY27 417 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 EHD2Q9NZN4 543 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 TRPM5Q9NZQ8 1165 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 MAGEC2Q9UBF1 373 aaPredicted RBP10.74□□□□□ -0.69
MDC1-202ENST00000416571 SEL1LQ9UBV2 794 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 CCDC39Q9UFE4 941 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 ARHGAP26Q9UNA1 814 aa10.74□□□□□ -0.69
MDC1-202ENST00000416571 K7EQS6 105 aa10.73□□□□□ -0.69
MDC1-202ENST00000416571 CDX4O14627 284 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms