RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 CDC6Q99741 560 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 PI4K2AQ9BTU6 479 aa17.05■□□□□ 0.32
CPNE1-208ENST00000414711 ABI2Q9NYB9 513 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-208ENST00000414711 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-208ENST00000414711 MYMKA6NI61 221 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 CCDC169A6NNP5 214 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 CPLX1O14810 134 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 RRP8O43159 456 aaKnown RBP17.04■□□□□ 0.32
CPNE1-208ENST00000414711 KAT7O95251 611 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 CXCL8P10145 99 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 GABRG2P18507 467 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 SRSF1Q07955 248 aaKnown RBP eCLIP17.04■□□□□ 0.32
CPNE1-208ENST00000414711 MESP2Q0VG99 397 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 NOLC1Q14978 699 aaKnown RBP eCLIP17.04■□□□□ 0.323e-8■□□□□ 8.2
CPNE1-208ENST00000414711 SMAD1Q15797 465 aaKnown RBP17.04■□□□□ 0.32
CPNE1-208ENST00000414711 EMC10Q5UCC4 262 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 TAS1R3Q7RTX0 852 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 CYP2S1Q96SQ9 504 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 IL21RQ9HBE5 538 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 UBQLN1Q9UMX0 589 aaKnown RBP17.04■□□□□ 0.32
CPNE1-208ENST00000414711 PIEZO2Q9H5I5 2752 aa17.04■□□□□ 0.32
CPNE1-208ENST00000414711 PPEF2O14830 753 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 TLX3O43711 291 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-208ENST00000414711 APODP05090 189 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 CYP17A1P05093 508 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 ZNF883P0CG24 379 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 CSH1P0DML2 217 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 CSH2P0DML3 217 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 CYP3A5P20815 502 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 GUCY2FP51841 1108 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 EVCP57679 992 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 SMARCB1Q12824 385 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 ZC2HC1CQ53FD0 456 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-208ENST00000414711 SYCP2LQ5T4T6 812 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 FAM181AQ8N9Y4 354 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 SENP8Q96LD8 212 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 PNKPQ96T60 521 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 TMEM134Q9H6X4 195 aa17.03■□□□□ 0.32
CPNE1-208ENST00000414711 UXTQ9UBK9 157 aaPredicted RBP17.03■□□□□ 0.32
CPNE1-208ENST00000414711 USP9XQ93008 2570 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-208ENST00000414711 ATMQ13315 3056 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 PLK4O00444 970 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 FLRT2O43155 660 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 NEMFO60524 1076 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 CER1O95813 267 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 TCF3P15923 654 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 RPS6KB1P23443 525 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 NPTX2P47972 431 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 GPR15P49685 360 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 LILRA4P59901 499 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 ZBTB6Q15916 424 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 TAF1BQ53T94 588 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-208ENST00000414711 ARL14EPQ8N8R7 260 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-208ENST00000414711 ZBTB45Q96K62 511 aaPredicted RBP17.02■□□□□ 0.32
CPNE1-208ENST00000414711 PLEKHA5Q9HAU0 1116 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 TM7SF3Q9NS93 570 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 ARHGAP28Q9P2N2 729 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 DNMT3LQ9UJW3 386 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 CYP8B1Q9UNU6 501 aa17.02■□□□□ 0.32
CPNE1-208ENST00000414711 FNDC3AQ9Y2H6 1198 aaKnown RBP17.02■□□□□ 0.32
CPNE1-208ENST00000414711 MGAQ8IWI9 3026 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-208ENST00000414711 ERVH48-1M5A8F1 160 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 CILPO75339 1184 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 ZNF217O75362 1048 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 CYP11A1P05108 521 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 EIF2DP41214 584 aaKnown RBP17.01■□□□□ 0.31
CPNE1-208ENST00000414711 SLC6A11P48066 632 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 PEX3P56589 373 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 KDSRQ06136 332 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 RESTQ13127 1097 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 KCNB1Q14721 858 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 WDR45BQ5MNZ6 344 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 SDHAF4Q5VUM1 108 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 LRRTM3Q86VH5 581 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 C12orf40Q86WS4 652 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 RHBDD1Q8TEB9 315 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 ZNF419Q96HQ0 510 aaPredicted RBP17.01■□□□□ 0.31
CPNE1-208ENST00000414711 DRC1Q96MC2 740 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 GAREM1Q9H706 876 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 ARHGEF4Q9NR80 690 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 GCNT4Q9P109 453 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 ARHGAP26Q9UNA1 814 aa17.01■□□□□ 0.31
CPNE1-208ENST00000414711 TTC26A0AVF1 554 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 XPOTO43592 962 aaKnown RBP17■□□□□ 0.31
CPNE1-208ENST00000414711 TOM1L1O75674 476 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 WISP1O95388 367 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 MAOBP27338 520 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 GRIA2P42262 883 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 SEMG2Q02383 582 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 PPP2R3AQ06190 1150 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 CCDC157Q569K6 752 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 BAP1Q92560 729 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 FOXJ1Q92949 421 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 TRMT2BQ96GJ1 504 aaKnown RBP17■□□□□ 0.31
CPNE1-208ENST00000414711 MTMR9Q96QG7 549 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 GJB4Q9NTQ9 266 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 DSEQ9UL01 958 aa17■□□□□ 0.31
CPNE1-208ENST00000414711 ANK1P16157 1881 aa16.99■□□□□ 0.31
CPNE1-208ENST00000414711 COL5A1P20908 1838 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms