RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 POLR3FQ9H1D9 316 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 RBAKQ9NYW8 714 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF70Q9UC06 446 aaPredicted RBP18.47■□□□□ 0.55
SDCBP-202ENST00000413219 STRIP2Q9ULQ0 834 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 ARID2Q68CP9 1835 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 CNTNAP1P78357 1384 aa18.47■□□□□ 0.55
SDCBP-202ENST00000413219 F8W8V4 182 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 WDR46O15213 610 aaKnown RBP18.46■□□□□ 0.55
SDCBP-202ENST00000413219 FAM155BO75949 473 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 GNAT1P11488 350 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 GAD2Q05329 585 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 GSTA3Q16772 222 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 SH2D5Q6ZV89 423 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 GPRASP2Q96D09 838 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 RMDN3Q96TC7 470 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 CNTN3Q9P232 1028 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 ZNF541Q9H0D2 1346 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 MAGEA13PA6NCF6 341 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 GOLGA8RI6L899 631 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 FCHO1O14526 889 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 MAFGO15525 162 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 MAP3K7O43318 606 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 SPAG6O75602 509 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 CDH5P33151 784 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-202ENST00000413219 RFC5P40937 340 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 ACOT2P49753 483 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 CBLBQ13191 982 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 NBPF20Q3BBV1 942 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 GNPTABQ3T906 1256 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 SCYL3Q8IZE3 742 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 UCMAQ8WVF2 138 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 SLC44A1Q8WWI5 657 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 RSAD2Q8WXG1 361 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 SLC38A10Q9HBR0 1119 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 FBXO6Q9NRD1 293 aaPredicted RBP18.46■□□□□ 0.55
SDCBP-202ENST00000413219 ANGPTL2Q9UKU9 493 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 AGTPBP1Q9UPW5 1226 aa18.46■□□□□ 0.55
SDCBP-202ENST00000413219 TESPA1A2RU30 521 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 ANKRD33BA6NCL7 494 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 UPP2O95045 317 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 ASNSP08243 561 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 KRT7P08729 469 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 GCLCP48506 637 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 GDF10P55107 478 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 PTK7Q13308 1070 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 BBS9Q3SYG4 887 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 THNSL1Q8IYQ7 743 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 KLF6Q99612 283 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 IMPG2Q9BZV3 1241 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 C12orf65Q9H3J6 166 aaKnown RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 CYP26B1Q9NR63 512 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 KCNK4Q9NYG8 393 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 IKBKGQ9Y6K9 419 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 CLRN2A0PK11 232 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 TMEM63AO94886 807 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 PSAPP07602 524 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 CDK18Q07002 472 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 NCOA4Q13772 614 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 SPDYE2Q495Y8 402 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 FKBP1CQ5VVH2 108 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 TRIM42Q8IWZ5 723 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 CPXCR1Q8N123 301 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 PDCD7Q8N8D1 485 aaKnown RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 CCDC110Q8TBZ0 833 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 WDR60Q8WVS4 1066 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 LPAR1Q92633 364 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 GATA6Q92908 595 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 ACSF2Q96CM8 615 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 GJD4Q96KN9 370 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 NR1H4Q96RI1 486 aaPredicted RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 RAVER2Q9HCJ3 691 aaKnown RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 WDR35Q9P2L0 1181 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 XPO7Q9UIA9 1087 aaKnown RBP18.45■□□□□ 0.54
SDCBP-202ENST00000413219 C2CD2Q9Y426 696 aa18.45■□□□□ 0.54
SDCBP-202ENST00000413219 ATP5BP06576 529 aaKnown RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 MYL2P10916 166 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 PGM1P36871 562 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 AP3M2P53677 418 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 ZNF200P98182 395 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 ARHGEF16Q5VV41 709 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 STYK1Q6J9G0 422 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 ZC3H18Q86VM9 953 aaKnown RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 TMPRSS6Q8IU80 811 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 PRR11Q96HE9 360 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 SERAC1Q96JX3 654 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 FAM111AQ96PZ2 611 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 ZNF184Q99676 751 aaPredicted RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 ALG13Q9NP73 1137 aaKnown RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 GINM1Q9NU53 330 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 DDX43Q9NXZ2 648 aaKnown RBP18.44■□□□□ 0.54
SDCBP-202ENST00000413219 PDP2Q9P2J9 529 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 CNTNAP2Q9UHC6 1331 aa18.44■□□□□ 0.54
SDCBP-202ENST00000413219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 ONECUT3O60422 494 aaPredicted RBP18.43■□□□□ 0.54
SDCBP-202ENST00000413219 CST8O60676 142 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 INHBAP08476 426 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 BGNP21810 368 aa18.43■□□□□ 0.54
SDCBP-202ENST00000413219 CCND2P30279 289 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms