RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 RGS7P49802 495 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 SNX16P57768 344 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 PRKCZQ05513 592 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 SV2CQ496J9 727 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 KCTD16Q68DU8 428 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 FAM183BPQ6ZVS7 135 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 ZNF365Q70YC5 407 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 ARRDC4Q8NCT1 418 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 NME7Q9Y5B8 376 aa25.95■■□□□ 1.74
DNMT3A-206ENST00000406659 ADCY8P40145 1251 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 ADCY2Q08462 1091 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 ZNF844Q08AG5 666 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 TRIM32Q13049 653 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 SLMAPQ14BN4 828 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 TRIP13Q15645 432 aaPredicted RBP25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 PKDCCQ504Y2 493 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 GSTA5Q7RTV2 222 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 TTC30AQ86WT1 665 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 ATP6V1G3Q96LB4 118 aa25.94■■□□□ 1.74
DNMT3A-206ENST00000406659 HMGB1P1B2RPK0 211 aaPredicted RBP25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 SPTLC1O15269 473 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 PDGFRBP09619 1106 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 CAPN2P17655 700 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 GPD1P21695 349 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 ZNF143P52747 638 aaPredicted RBP25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 SOX4Q06945 474 aaPredicted RBP25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 CACNB2Q08289 660 aaPredicted RBP25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 IFFO1Q0D2I5 559 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 ARHGAP17Q68EM7 881 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 CYP4F22Q6NT55 531 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 APPL2Q8NEU8 664 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 PABPC3Q9H361 631 aaKnown RBP25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 CENPHQ9H3R5 247 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 GOLGA2P5Q9HBQ8 144 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 ST3GAL5Q9UNP4 418 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 SCN10AQ9Y5Y9 1956 aa25.93■■□□□ 1.74
DNMT3A-206ENST00000406659 LIASO43766 372 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 IL1R2P27930 398 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 EIF3BP55884 814 aaKnown RBP25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 NKX3-2P78367 333 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 SMTNL2Q2TAL5 461 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 PMF1Q6P1K2 205 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 SH2D3CQ8N5H7 860 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 CNPY3Q9BT09 278 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 DPEP3Q9H4B8 488 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 XPNPEP3Q9NQH7 507 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 PCSK1NQ9UHG2 260 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 C3orf70A6NLC5 250 aaPredicted RBP25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 HUS1O60921 280 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 MYCNP04198 464 aaPredicted RBP25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 CTSHP09668 335 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 PDGFRAP16234 1089 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 IVDP26440 423 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 MIPP30301 263 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 CAV1Q03135 178 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 BYSLQ13895 437 aaKnown RBP25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 DENND2CQ68D51 928 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 DRICH1Q6PGQ1 229 aaPredicted RBP25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 SERINC5Q86VE9 423 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 HACE1Q8IYU2 909 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 CRYBG2Q8N1P7 616 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 CCDC89Q8N998 374 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 KBTBD7Q8WVZ9 684 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 RXFP2Q8WXD0 754 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 SLC4A5Q9BY07 1137 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 EFR3BQ9Y2G0 817 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 NEU2Q9Y3R4 380 aa25.92■■□□□ 1.74
DNMT3A-206ENST00000406659 TRUB2O95900 331 aaKnown RBP25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 FGFR1P11362 822 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 KDELR1P24390 212 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 KCNT1Q5JUK3 1230 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 KCTD6Q8NC69 237 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 BBOF1Q8ND07 529 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 SMC1BQ8NDV3 1235 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 SLC35F5Q8WV83 523 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 LPIN3Q9BQK8 851 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 ANAPC5Q9UJX4 755 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 DNPEPQ9ULA0 475 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 ZNF148Q9UQR1 794 aa25.91■■□□□ 1.74
DNMT3A-206ENST00000406659 C2CD4BA6NLJ0 364 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 TULP2O00295 520 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 RPLP2P05387 115 aaKnown RBP25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 PCK1P35558 622 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 PDE4CQ08493 712 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 TMEM110Q86TL2 294 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 CCDC25Q86WR0 208 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 STK32AQ8WU08 396 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 SENP6Q9GZR1 1112 aaPredicted RBP25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 CHST12Q9NRB3 414 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 USP18Q9UMW8 372 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 DRG1Q9Y295 367 aaKnown RBP25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 ADAMTS4O75173 837 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 CHRNA1P02708 482 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 RARGP13631 454 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 VPS41P49754 854 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 ITGA8P53708 1063 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 LILRA4P59901 499 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 DNAJC21Q5F1R6 531 aaKnown RBP25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 WNT8BQ93098 351 aa25.9■■□□□ 1.74
DNMT3A-206ENST00000406659 PKNOX2Q96KN3 472 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms