RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 TROVE2P10155 538 aaKnown RBP eCLIP12.55□□□□□ -0.4
RBM39-206ENST00000403542 RBP3P10745 1247 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 EIF3EP60228 445 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 PTK7Q13308 1070 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PRPF39Q86UA1 669 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 AGGF1Q8N302 714 aaeCLIP12.55□□□□□ -0.44e-21■□□□□ 8
RBM39-206ENST00000403542 RIBC1Q8N443 379 aaPredicted RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 ATP11CQ8NB49 1132 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 NETO2Q8NC67 525 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 SPATA18Q8TC71 538 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TRAPPC12Q8WVT3 735 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 CPXM1Q96SM3 734 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TSSK1BQ9BXA7 367 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PPP1R12CQ9BZL4 782 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 C17orf75Q9HAS0 396 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PCDH9Q9HC56 1237 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 GPATCH2LQ9NWQ4 482 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 HEY1Q9Y5J3 304 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 NR2E3Q9Y5X4 410 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 COL4A5P29400 1685 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 CYB561D2O14569 222 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 GYG2O15488 501 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TBC1D12O60347 775 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 OATP04181 439 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 SUPT20HL2P0C7V6 817 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TBXAS1P24557 533 aaPredicted RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 TGFB2P61812 414 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 RCN1Q15293 331 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 SUPT20HL1Q3ZLR7 823 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 SCYL2Q6P3W7 929 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 DLK2Q6UY11 383 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 CDHR3Q6ZTQ4 885 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 HOMEZQ8IX15 550 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 NIM1KQ8IY84 436 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PDIK1LQ8N165 341 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 VPS52Q8N1B4 723 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PPM1NQ8N819 430 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TTLL6Q8N841 843 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 FBXO27Q8NI29 283 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 UBA3Q8TBC4 463 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 MCUR1Q96AQ8 359 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 GPRASP2Q96D09 838 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 TMEM120AQ9BXJ8 343 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PORCNQ9H237 461 aa12.55□□□□□ -0.4
RBM39-206ENST00000403542 PIH1D1Q9NWS0 290 aaKnown RBP12.55□□□□□ -0.4
RBM39-206ENST00000403542 MAGEB2O15479 319 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 B4GALT5O43286 388 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 UGT1A9O60656 530 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 HAUS5O94927 633 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 CALB1P05937 261 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 GNAZP19086 355 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 PSEN1P49768 467 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 ARFIP2P53365 341 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 CCDC15Q0P6D6 951 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 DARS2Q6PI48 645 aaKnown RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 RELL1Q8IUW5 271 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 PPIL6Q8IXY8 311 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 RNF149Q8NC42 400 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 UCMAQ8WVF2 138 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 WDR60Q8WVS4 1066 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 NLRP4Q96MN2 994 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 UGT1A7Q9HAW7 530 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 UGT1A10Q9HAW8 530 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 UGT1A8Q9HAW9 530 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 SHOC2Q9UQ13 582 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 EME2A4GXA9 379 aaPredicted RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 DPPA5A6NC42 116 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 SMNDC1O75940 238 aaKnown RBP eCLIP12.54□□□□□ -0.48e-11■■■□□ 15.9
RBM39-206ENST00000403542 ASS1P00966 412 aaKnown RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 ITGAVP06756 1048 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 MYL2P10916 166 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 SKIV2L2P42285 1042 aaKnown RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 CLDN10P78369 228 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 GNPTABQ3T906 1256 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 RINLQ6ZS11 566 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 VCPIP1Q96JH7 1222 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 CLPTM1LQ96KA5 538 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 WRNIP1Q96S55 665 aa12.54□□□□□ -0.4
RBM39-206ENST00000403542 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.54□□□□□ -0.4
RBM39-206ENST00000403542 TCRBV9S1A1TA0A576 114 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 C3orf70A6NLC5 250 aaPredicted RBP12.53□□□□□ -0.4
RBM39-206ENST00000403542 H7C0C1 242 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 PTPN4P29074 926 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 PHBP35232 272 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 ATP5OP48047 213 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 KDSRQ06136 332 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 ANO7Q6IWH7 933 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 ZCCHC23Q6ZST2 131 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 FAM83AQ86UY5 434 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 NAT8LQ8N9F0 302 aa12.53□□□□□ -0.4
RBM39-206ENST00000403542 PIWIL1Q96J94 861 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms