RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 EFHD1Q9BUP0 239 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 METTL5Q9NRN9 209 aaKnown RBP5.7□□□□□ -1.5
PTPRD-205ENST00000397611 FBXO40Q9UH90 709 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 A0A0B4J269 797 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
PTPRD-205ENST00000397611 EXTL3O43909 919 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 HSPA4LO95757 839 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 SCNN1AP37088 669 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 POLGP54098 1239 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-205ENST00000397611 HADHQ16836 314 aaKnown RBP5.7□□□□□ -1.5
PTPRD-205ENST00000397611 ZC2HC1CQ53FD0 456 aaPredicted RBP5.7□□□□□ -1.5
PTPRD-205ENST00000397611 FAM102BQ5T8I3 360 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 BRSK2Q8IWQ3 736 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 CYP2W1Q8TAV3 490 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 C18orf8Q96DM3 657 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 DDX28Q9NUL7 540 aaKnown RBP5.7□□□□□ -1.5
PTPRD-205ENST00000397611 NDUFA13Q9P0J0 144 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 LNPEPQ9UIQ6 1025 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 PCDHGC3Q9UN70 934 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 SATB2Q9UPW6 733 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 NAALADL1Q9UQQ1 740 aa5.7□□□□□ -1.5
PTPRD-205ENST00000397611 COL4A1P02462 1669 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 WNK3Q9BYP7 1800 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KRT3P12035 628 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 RRM1P23921 792 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 PTPN4P29074 926 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 GARSP41250 739 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 NPTX2P47972 431 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 SNX16P57768 344 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MYL6P60660 151 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MAMLD1Q13495 774 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 RPS6KA2Q15349 733 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MAPK6Q16659 721 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 SPDYE2Q495Y8 402 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 IRGCQ6NXR0 463 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ANKMY2Q8IV38 441 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 GALNT4Q8N4A0 578 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 NSUN6Q8TEA1 469 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 SLC20A1Q8WUM9 679 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KLF6Q99612 283 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 BEGAINQ9BUH8 593 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CLUHO75153 1309 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KRT37O76014 449 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ERBB2P04626 1255 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 XIAPP98170 497 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 LBRQ14739 615 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 DLGAP5Q15398 846 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KCTD21Q4G0X4 260 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 RARS2Q5T160 578 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 OLFML1Q6UWY5 402 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 DEPDC1BQ8WUY9 529 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 L3MBTL3Q96JM7 780 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 PARVAQ9NVD7 372 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 DDX18Q9NVP1 670 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF229Q9UJW7 825 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 USP21Q9UK80 565 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 PHTF1Q9UMS5 762 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KDM4FA0A1W2PPD8 638 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KRT75O95678 551 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 PIK3CAP42336 1068 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 WDR4P57081 412 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CBWD2Q8IUF1 395 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 RTKN2Q8IZC4 609 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CDKL2Q92772 493 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CASP10Q92851 521 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 C9orf72Q96LT7 481 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CNBD2Q96M20 576 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 DHRS4Q9BTZ2 278 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 THTPAQ9BU02 230 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 PNPLA8Q9NP80 782 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KRT82Q9NSB4 513 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MARCOQ9UEW3 520 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MAGED2Q9UNF1 606 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KRT19P08727 400 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ACO1P21399 889 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MARCKSL1P49006 195 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 SLC12A2P55011 1212 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CNGA3Q16281 694 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 EGFL6Q8IUX8 553 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 FITM2Q8N6M3 262 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MCUQ8NE86 351 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 STK32AQ8WU08 396 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ZBED3Q96IU2 234 aaPredicted RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 VRTNQ9H8Y1 702 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 XPNPEP1Q9NQW7 623 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ZNF180Q9UJW8 692 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 STAU1O95793 577 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 NR3C2P08235 984 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ICAM3P32942 547 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 NEK2P51955 445 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 ITGA8P53708 1063 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 PRAMEP78395 509 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MFSD4BQ5TF39 518 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 MON1BQ7L1V2 547 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 FAM228AQ86W67 206 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 WDR75Q8IWA0 830 aaKnown RBP5.69□□□□□ -1.5
PTPRD-205ENST00000397611 KLHL23Q8NBE8 558 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 CCT7Q99832 543 aa5.69□□□□□ -1.5
PTPRD-205ENST00000397611 LHX5Q9H2C1 402 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms