RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 ATF6P18850 670 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 ADORA2BP29275 332 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 GNA15P30679 374 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 SOX5P35711 763 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 USP8P40818 1118 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 EPHB3P54753 998 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 PLCB2Q00722 1185 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 PTK2Q05397 1052 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 TWF1Q12792 350 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 TRIM14Q14142 442 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 VEPH1Q14D04 833 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 CNGA2Q16280 664 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 PTPN21Q16825 1174 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 EP400NLQ6ZTU2 488 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 GPR149Q86SP6 731 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 ITIH5Q86UX2 942 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 VSTM4Q8IW00 320 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 ELMOD1Q8N336 334 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 BAP1Q92560 729 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 ZNF707Q96C28 371 aaPredicted RBP17.41■□□□□ 0.38
AP1S3-202ENST00000396653 SPATA17Q96L03 361 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 ADAM7Q9H2U9 754 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 PNPLA8Q9NP80 782 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 TSPAN16Q9UKR8 245 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.41■□□□□ 0.38
AP1S3-202ENST00000396653 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.41■□□□□ 0.38
AP1S3-202ENST00000396653 OBSL1O75147 1896 aa17.41■□□□□ 0.38
AP1S3-202ENST00000396653 NOTCH4Q99466 2003 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 MYO16Q9Y6X6 1858 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 CYP26A1O43174 497 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 MED7O43513 233 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 AP1G2O75843 785 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 PNMA6AP0CW24 399 aaPredicted RBP17.4■□□□□ 0.38
AP1S3-202ENST00000396653 NPR3P17342 541 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 KCNA5P22460 613 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 BRD2P25440 801 aaKnown RBP17.4■□□□□ 0.38
AP1S3-202ENST00000396653 ANXA13P27216 316 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 CLCN1P35523 988 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 GRIK1P39086 918 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 BCAT1P54687 386 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 SMAD4Q13485 552 aaKnown RBP17.4■□□□□ 0.38
AP1S3-202ENST00000396653 RARS2Q5T160 578 aaKnown RBP17.4■□□□□ 0.38
AP1S3-202ENST00000396653 SPECC1LQ69YQ0 1117 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 CES5AQ6NT32 575 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 LCLAT1Q6UWP7 414 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 SCN4BQ8IWT1 228 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 ANKRD52Q8NB46 1076 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 TFAP2BQ92481 460 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 PSMG2Q969U7 264 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 MRFAP1L1Q96HT8 127 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 DUSP16Q9BY84 665 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 HESX1Q9UBX0 185 aa17.4■□□□□ 0.38
AP1S3-202ENST00000396653 DOCK6Q96HP0 2047 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 F8VP50 259 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 CCL16O15467 120 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 SOAT2O75908 522 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 CSH1P0DML2 217 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 CSH2P0DML3 217 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 PDE6CP51160 858 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 GOLGA7BQ2TAP0 167 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 LEXMQ3ZCV2 418 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 PKDCCQ504Y2 493 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 TMC5Q6UXY8 1006 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 CLEC20AQ6ZU45 233 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 TTC30AQ86WT1 665 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 C12orf76Q8N812 135 aaPredicted RBP17.39■□□□□ 0.37
AP1S3-202ENST00000396653 LEMD2Q8NC56 503 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 ZMIZ2Q8NF64 920 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 ZNF606Q8WXB4 792 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 SMG7Q92540 1137 aaKnown RBP17.39■□□□□ 0.37
AP1S3-202ENST00000396653 ZNF512Q96ME7 567 aaPredicted RBP17.39■□□□□ 0.37
AP1S3-202ENST00000396653 RIPOR3Q96MK2 946 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 SMOQ99835 787 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 ZSWIM1Q9BR11 485 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 NUCKS1Q9H1E3 243 aaKnown RBP17.39■□□□□ 0.37
AP1S3-202ENST00000396653 AVENQ9NQS1 362 aaPredicted RBP17.39■□□□□ 0.37
AP1S3-202ENST00000396653 TMEM30AQ9NV96 361 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 THEGQ9P2T0 379 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 PCDHGC3Q9UN70 934 aa17.39■□□□□ 0.37
AP1S3-202ENST00000396653 H3BQ06 376 aaPredicted RBP17.38■□□□□ 0.37
AP1S3-202ENST00000396653 THAP12O43422 761 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 CCDC172P0C7W6 258 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 FERP16591 822 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 MTHFRP42898 656 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 GPR15P49685 360 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 ZNF75DP51815 510 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 CACNA2D1P54289 1103 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 EPHA5P54756 1037 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 SLC8A3P57103 927 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 BST2Q10589 180 aaKnown RBP17.38■□□□□ 0.37
AP1S3-202ENST00000396653 DDR2Q16832 855 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 PUS10Q3MIT2 529 aaKnown RBP17.38■□□□□ 0.37
AP1S3-202ENST00000396653 SLC47A2Q86VL8 602 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 ZNF677Q86XU0 584 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 EPS8L1Q8TE68 723 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 SUSD6Q92537 303 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 TRMT2BQ96GJ1 504 aaKnown RBP17.38■□□□□ 0.37
AP1S3-202ENST00000396653 NECTIN4Q96NY8 510 aa17.38■□□□□ 0.37
AP1S3-202ENST00000396653 UBXN6Q9BZV1 441 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms