RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 COLEC11Q9BWP8 271 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 UNKQ9C0B0 810 aaKnown RBP9.67□□□□□ -0.86
PFDN6-205ENST00000395134 SEMA4AQ9H3S1 761 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 ATP6V0A4Q9HBG4 840 aa9.67□□□□□ -0.86
PFDN6-205ENST00000395134 GRIN2DO15399 1336 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 M0R082 166 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 CLASP2O75122 1294 aaKnown RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 GFPT2O94808 682 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 ICAM1P05362 532 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 LPLP06858 475 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 GSTM1P09488 218 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 GOLGA8HP0CJ92 632 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 TOP1P11387 765 aaKnown RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 CDK7P50613 346 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 PPIGQ13427 754 aaKnown RBP eCLIP9.66□□□□□ -0.862e-6■■□□□ 13.2
PFDN6-205ENST00000395134 PMS2P11Q13670 270 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 ITGA7Q13683 1181 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 USH1GQ495M9 461 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 MCMDC2Q4G0Z9 681 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 PAN2Q504Q3 1202 aaKnown RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 TAPT1Q6NXT6 567 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 KIAA1211Q6ZU35 1233 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 ZNF365Q70YC5 407 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 CPNE8Q86YQ8 564 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 CREBRFQ8IUR6 639 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 LIX1LQ8IVB5 337 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 RNF152Q8N8N0 203 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 C2CD4AQ8NCU7 369 aaPredicted RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 Q96M66 194 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 RMDN3Q96TC7 470 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 MAGEH1Q9H213 219 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 RANBP17Q9H2T7 1088 aaKnown RBP9.66□□□□□ -0.86
PFDN6-205ENST00000395134 HIPK3Q9H422 1215 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 PLEKHA5Q9HAU0 1116 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 HELLSQ9NRZ9 838 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 ADGRE2Q9UHX3 823 aa9.66□□□□□ -0.86
PFDN6-205ENST00000395134 COL4A4P53420 1690 aaPredicted RBP9.65□□□□□ -0.86
PFDN6-205ENST00000395134 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.65□□□□□ -0.86
PFDN6-205ENST00000395134 SHISA3A0PJX4 238 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 B4E171 279 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 H7BY64 318 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 IRAK2O43187 625 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 B4GALT4O60513 344 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 PLA2G6O60733 806 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 IL18RAPO95256 599 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 PDHBP11177 359 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 CYP2C9P11712 490 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 COL6A2P12110 1019 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 TSPAN7P41732 249 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 RAD52P43351 418 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 ALDH9A1P49189 494 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 GALNT1Q10472 559 aaPredicted RBP9.65□□□□□ -0.86
PFDN6-205ENST00000395134 TAF5Q15542 800 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 ALX1Q15699 326 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 MPEG1Q2M385 716 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 ZACNQ401N2 412 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 GPATCH4Q5T3I0 446 aaKnown RBP9.65□□□□□ -0.86
PFDN6-205ENST00000395134 OTOP2Q7RTS6 562 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 TMEM199Q8N511 208 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 OR6J1Q8NGC5 347 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 WNT8AQ9H1J5 351 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 PRDM12Q9H4Q4 367 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 PNPLA8Q9NP80 782 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 UBN1Q9NPG3 1134 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 ATP13A2Q9NQ11 1180 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 WASH6PQ9NQA3 447 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 VPS45Q9NRW7 570 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 ZNF281Q9Y2X9 895 aa9.65□□□□□ -0.86
PFDN6-205ENST00000395134 MICAL3Q7RTP6 2002 aa9.65□□□□□ -0.87
PFDN6-205ENST00000395134 LOXHD1Q8IVV2 1947 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.64□□□□□ -0.87
PFDN6-205ENST00000395134 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.64□□□□□ -0.87
PFDN6-205ENST00000395134 GOLGA6L3A6NEY3 463 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 DDX3XO00571 662 aaKnown RBP eCLIP9.64□□□□□ -0.874e-9■■■■□ 21.5
PFDN6-205ENST00000395134 APOL1O14791 398 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 NKRFO15226 690 aaKnown RBP eCLIP9.64□□□□□ -0.87
PFDN6-205ENST00000395134 WISP1O95388 367 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 RPS6KB1P23443 525 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 MAP2K6P52564 334 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 RABGGTBP53611 331 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 RAB1AP62820 205 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 DAG1Q14118 895 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 PFKFB4Q16877 469 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 C3orf36Q3SXR2 165 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 FIGNQ5HY92 759 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 RTP2Q5QGT7 225 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 AKNAD1Q5T1N1 836 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 PSRC1Q6PGN9 363 aaPredicted RBP9.64□□□□□ -0.87
PFDN6-205ENST00000395134 RNF207Q6ZRF8 634 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 MFSD6Q6ZSS7 791 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 TMTC1Q8IUR5 882 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 CCDC33Q8N5R6 958 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 ESX1Q8N693 406 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 PCYOX1LQ8NBM8 494 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 SH3RF2Q8TEC5 729 aa9.64□□□□□ -0.87
PFDN6-205ENST00000395134 CLEC4DQ8WXI8 215 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms