RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 RPP25Q9BUL9 199 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RSRP1Q9BUV0 290 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 MXD3Q9BW11 206 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 JAM3Q9BX67 310 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CD244Q9BZW8 370 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 BTBD1Q9H0C5 482 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DHX36Q9H2U1 1008 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PARLQ9H300 379 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CDIP1Q9H305 208 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 CLK4Q9HAZ1 481 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PRDM16Q9HAZ2 1276 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ZNF304Q9HCX3 659 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FZD3Q9NPG1 666 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 GPRC5CQ9NQ84 441 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ARHGEF3Q9NR81 526 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RBM12Q9NTZ6 932 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SERTAD4Q9NUC0 356 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 RNF19AQ9NV58 838 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 INTS7Q9NVH2 962 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM86C1Q9NVL1 165 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 UCKL1Q9NWZ5 548 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TMEM160Q9NX00 188 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 EHD3Q9NZN3 535 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KCMF1Q9P0J7 381 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 THEGQ9P2T0 379 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TFIP11Q9UBB9 837 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM8A1Q9UBU6 413 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 B4GALT7Q9UBV7 327 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 USP25Q9UHP3 1055 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 DNAI1Q9UI46 699 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 TINAGQ9UJW2 476 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ANAPC4Q9UJX5 808 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KLK13Q9UKR3 277 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PCDHA12Q9UN75 941 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NEU2Q9Y3R4 380 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 SAMHD1Q9Y3Z3 626 aaKnown RBP-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 LOXL2Q9Y4K0 774 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 PCDHB14Q9Y5E9 798 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 INSL5Q9Y5Q6 135 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NR2E3Q9Y5X4 410 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 ATP23Q9Y6H3 246 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 KIF25-AS1Q9Y6Z4 181 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 HYDINQ4G0P3 5121 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 COL1A2P08123 1366 aa-0.2□□□□□ -2.44
TRAJ28-201ENST00000390509 NAV2Q8IVL1 2488 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SCN5AQ14524 2016 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 BAHCC1Q9P281 2608 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ITGB4P16144 1822 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SAA2-SAA4A0A096LPE2 208 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PRAMEF33A0A0G2JMD5 474 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 A0A1W2PQM1 296 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM86C2PA6NEL3 165 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 UNCXA6NJT0 531 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FAM90A27PA6NNH2 459 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 POM121CA8CG34 1229 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 BTBD19C9JJ37 291 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MCIDASD6RGH6 385 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 F8W810 466 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 EYA2O00167 538 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TCERG1O14776 1098 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PHOX2AO14813 284 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CLGNO14967 610 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 NPC1O15118 1278 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 GPR182O15218 404 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 HDAC3O15379 428 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MAFGO15525 162 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 AKAP10O43572 662 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TLX3O43711 291 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 DHX16O60231 1041 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 EXOC3O60645 756 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PRAMEF10O60809 474 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ITGA10O75578 1167 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 GCATO75600 419 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CBR3O75828 277 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 KCNH1O95259 989 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ATE1O95260 518 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 WISP3O95389 354 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 F13A1P00488 732 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TP53P04637 393 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PROS1P07225 676 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 TUBBP07437 444 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PRSS1P07477 247 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 RHOP08100 348 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 MMEP08473 750 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ITGA2BP08514 1039 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 SNRPA1P09661 255 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 NPSP0C0P6 89 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ZCCHC18P0CG32 403 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 JUPP14923 745 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 NME1P15531 152 aaKnown RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 PPP3CBP16298 524 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ATP2B4P23634 1241 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 GRK2P25098 689 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 ACVR2AP27037 513 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 HOXD3P31249 432 aaPredicted RBP-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 CYP2C18P33260 490 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 GRK3P35626 688 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 FLT3P36888 993 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 KIR3DL2P43630 455 aa-0.21□□□□□ -2.44
TRAJ28-201ENST00000390509 KIR2DS4P43632 304 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms