RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 GPR15P49685 360 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 ARID5AQ03989 594 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 PTK2Q05397 1052 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 CNGA2Q16280 664 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 DDR2Q16832 855 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 E4F1Q66K89 784 aaPredicted RBP13.43□□□□□ -0.26
SMN1-202ENST00000380707 LCLAT1Q6UWP7 414 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 EP400NLQ6ZTU2 488 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 CCDC149Q6ZUS6 474 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 GPR152Q8TDT2 470 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 PABPC5Q96DU9 382 aaKnown RBP13.43□□□□□ -0.26
SMN1-202ENST00000380707 IQCDQ96DY2 449 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 SMARCD1Q96GM5 515 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 KCNK16Q96T55 309 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 SMOQ99835 787 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 KRT82Q9NSB4 513 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 TSPAN16Q9UKR8 245 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMN1-202ENST00000380707 LUC7L2Q9Y383 392 aaKnown RBP13.43□□□□□ -0.26
SMN1-202ENST00000380707 YIPF1Q9Y548 306 aa13.43□□□□□ -0.26
SMN1-202ENST00000380707 F8VP50 259 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 THAP12O43422 761 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 ZMYND10O75800 440 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 ATF6P18850 670 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 GRIK1P39086 918 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 BPIFB4P59827 614 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 ZBED6P86452 979 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 TWF1Q12792 350 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 TBX2Q13207 712 aaPredicted RBP13.42□□□□□ -0.26
SMN1-202ENST00000380707 GOLGA7BQ2TAP0 167 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 PPM1LQ5SGD2 360 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 SDHAF4Q5VUM1 108 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 ANKRD54Q6NXT1 300 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 SYCE2Q6PIF2 218 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 VSTM1Q6UX27 236 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 CLEC20AQ6ZU45 233 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 IRF2BP2Q7Z5L9 587 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 NOP9Q86U38 636 aaKnown RBP13.42□□□□□ -0.26
SMN1-202ENST00000380707 TTC30AQ86WT1 665 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 SCN4BQ8IWT1 228 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 ANKRD52Q8NB46 1076 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 DUSP16Q9BY84 665 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 DZANK1Q9NVP4 752 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 PTPRDP23468 1912 aa13.42□□□□□ -0.26
SMN1-202ENST00000380707 ATP8B3O60423 1300 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 CCDC195A0A1B0GUA6 201 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 SPDYE4A6NLX3 237 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 CCL16O15467 120 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 MICAL2O94851 1124 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 FAM200BP0CF97 657 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 SRGAP2BP0DMP2 458 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 ALDH1A3P47895 512 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 MAP3K7CLP57077 242 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 GOLGA8FQ08AF8 430 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 GOLGA8DPQ0D2H9 430 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 TRIM14Q14142 442 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 GSE1Q14687 1217 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 SKIV2LQ15477 1246 aaKnown RBP13.41□□□□□ -0.26
SMN1-202ENST00000380707 PKDCCQ504Y2 493 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 SFMBT2Q5VUG0 894 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 ELMSAN1Q6PJG2 1045 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 TMC5Q6UXY8 1006 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 RTL10Q7L3V2 364 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 STKLD1Q8NE28 680 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 ZMIZ2Q8NF64 920 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 ZNF397Q8NF99 534 aaPredicted RBP13.41□□□□□ -0.26
SMN1-202ENST00000380707 UBA3Q8TBC4 463 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 EPS8L1Q8TE68 723 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 GIPC2Q8TF65 315 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 SLC20A1Q8WUM9 679 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 DDX1Q92499 740 aaKnown RBP13.41□□□□□ -0.26
SMN1-202ENST00000380707 ZNF707Q96C28 371 aaPredicted RBP13.41□□□□□ -0.26
SMN1-202ENST00000380707 APOL5Q9BWW9 433 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 SFXN1Q9H9B4 322 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 CSNK1G1Q9HCP0 422 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 ZDHHC7Q9NXF8 308 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 AIPL1Q9NZN9 384 aa13.41□□□□□ -0.26
SMN1-202ENST00000380707 NOCTQ9UK39 431 aaKnown RBP13.41□□□□□ -0.26
SMN1-202ENST00000380707 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.4□□□□□ -0.26
SMN1-202ENST00000380707 TULP2O00295 520 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 TRIM66O15016 1216 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 MED7O43513 233 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 PAPLNO95428 1278 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 LRG1P02750 347 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 HNRNPA1P09651 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMN1-202ENST00000380707 FERP16591 822 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 NPR3P17342 541 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 HOXA9P31269 272 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 KRT9P35527 623 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 PDE6CP51160 858 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 ADKP55263 362 aaKnown RBP13.4□□□□□ -0.26
SMN1-202ENST00000380707 RPL10AP62906 217 aaKnown RBP13.4□□□□□ -0.26
SMN1-202ENST00000380707 STILQ15468 1287 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
SMN1-202ENST00000380707 TAF3Q5VWG9 929 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 DENND1BQ6P3S1 775 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 MAFAQ8NHW3 353 aaPredicted RBP13.4□□□□□ -0.26
SMN1-202ENST00000380707 MSLNLQ96KJ4 702 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 C8orf48Q96LL4 319 aa13.4□□□□□ -0.26
SMN1-202ENST00000380707 PRKD2Q9BZL6 878 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms