RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 MYBL1P10243 752 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 ARF4P18085 180 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 HSPA9P38646 679 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CLNS1AP54105 237 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 SLC12A2P55011 1212 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 NCKAP1LP55160 1127 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 MAP3K7CLP57077 242 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 JAM2P57087 298 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 GCNT1Q02742 428 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 LAMC2Q13753 1193 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 XRRA1Q6P2D8 792 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 LVRNQ6Q4G3 990 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CROCCP2Q86T23 111 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 TMEM176AQ96HP8 235 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CELF6Q96J87 481 aaKnown RBP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 PGLYRP2Q96PD5 576 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 DCLK3Q9C098 648 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 KLC2Q9H0B6 622 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 CD248Q9HCU0 757 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 UBN1Q9NPG3 1134 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 ACSS2Q9NR19 701 aa11.65□□□□□ -0.54
HDAC6-203ENST00000376619 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.65□□□□□ -0.54
HDAC6-203ENST00000376619 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 M0QYT0 321 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 ACKR2O00590 384 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 DDX3YO15523 660 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 GBP1P32455 592 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 KDSRQ06136 332 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 PIGHQ14442 188 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 QPCTQ16769 361 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 DENND5BQ6ZUT9 1274 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 BRSK2Q8IWQ3 736 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 DTX3LQ8TDB6 740 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 PPP4R1Q8TF05 950 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 CAVIN3Q969G5 261 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 ERP27Q96DN0 273 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SGF29Q96ES7 293 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 FAM111AQ96PZ2 611 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SNCAIPQ9Y6H5 919 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 FAM107AO95990 144 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 ATXN1P54253 815 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SARNPP82979 210 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 POU5F1BQ06416 359 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 FOXD4Q12950 439 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 PKN2Q16513 984 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 COBLL1Q53SF7 1204 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 TFDP3Q5H9I0 405 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 GLIS1Q8NBF1 620 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 DNERQ8NFT8 737 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 RDM1Q8NG50 284 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SLC2A14Q8TDB8 520 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 USP6NLQ92738 828 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 CPXM1Q96SM3 734 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 FAM167BQ9BTA0 163 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 NXF3Q9H4D5 531 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 CENPFP49454 3210 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 A0A0A6YYK5 440 aaPredicted RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 FZD9O00144 591 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 TSPAN3O60637 253 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 MICAL2O94851 1124 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 TPH1P17752 444 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 FECHP22830 423 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 THPOP40225 353 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 GTF2A2P52657 109 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 CELF3Q5SZQ8 465 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 C6orf163Q5TEZ5 329 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SLCO1B3Q9NPD5 702 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 ABCF3Q9NUQ8 709 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 UBR3Q6ZT12 1888 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 A0A0B4J269 797 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 CCDC160A6NGH7 325 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 XPOTO43592 962 aaKnown RBP11.64□□□□□ -0.55
HDAC6-203ENST00000376619 RECQL4O94761 1208 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 GHRP10912 638 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 RARGP13631 454 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 GPD1P21695 349 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 AMPD1P23109 780 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 NOMO3P69849 1222 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 CCDC14Q49A88 953 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SPOCK2Q92563 424 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 SPON2Q9BUD6 331 aa11.64□□□□□ -0.55
HDAC6-203ENST00000376619 MYPNQ86TC9 1320 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 LOC100653049A0A140TA62 436 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 APOL1O14791 398 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 KRT34O76011 436 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 EPHB1P54762 984 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 SNCBQ16143 134 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 PTPN20Q4JDL3 420 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 NIPA1Q7RTP0 329 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 CTU1Q7Z7A3 348 aaKnown RBP11.63□□□□□ -0.55
HDAC6-203ENST00000376619 MIB1Q86YT6 1006 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 SLC9A9Q8IVB4 645 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 CCNYL1Q8N7R7 359 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 RNF139Q8WU17 664 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 FIZ1Q96SL8 496 aa11.63□□□□□ -0.55
HDAC6-203ENST00000376619 GAD1Q99259 594 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms