RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 FASTKD1Q53R41 847 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 PREBQ9HCU5 417 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 CDH9Q9ULB4 789 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ABCC9O60706 1549 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 EXTL3O43909 919 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 MMP1P03956 469 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PSMA2P25787 234 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TBRG1Q3YBR2 411 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ANKRD6Q9Y2G4 727 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 GPAA1O43292 621 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PRKAA1Q13131 559 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SPARTQ8N0X7 666 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PJA1Q8NG27 643 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 C15orf40Q8WUR7 153 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TMEM9Q9P0T7 183 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 C3orf18Q9UK00 162 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 NUP50Q9UKX7 468 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 FAM95CA0A1B0GW59 222 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 FAM92AA1XBS5 289 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 WDR64B1ANS9 1081 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 LDHBP07195 334 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 IZUMO3Q5VZ72 239 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TMEM132EQ6IEE7 984 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PYHIN1Q6K0P9 492 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 NLRP10Q86W26 655 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 MCUQ8NE86 351 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SLC35G2Q8TBE7 412 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 DDX47Q9H0S4 455 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 IGSF9Q9P2J2 1179 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 GIT1Q9Y2X7 761 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TEX28O15482 410 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TGDSO95455 350 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TRIM65Q6PJ69 517 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 BIRC8Q96P09 236 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PRDM16Q9HAZ2 1276 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 VANGL2Q9ULK5 521 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 LRRC10BA6NIK2 292 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 H3BMM5 538 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 POU5F1Q01860 360 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 CMPK2Q5EBM0 449 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SLC26A11Q86WA9 606 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TEX47Q8TBZ9 253 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TBC1D15Q8TC07 691 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PLEKHO2Q8TD55 490 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ERGIC3Q9Y282 383 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ABCC12Q96J65 1359 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 IRGMA1A4Y4 181 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 RECQL5O94762 991 aaPredicted RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 LYNP07948 512 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 CDH18Q13634 790 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 LONRF1Q17RB8 773 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ZBED5Q49AG3 693 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 CDC73Q6P1J9 531 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 RNF19BQ6ZMZ0 732 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 RP9Q8TA86 221 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 CDRT15Q96T59 188 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 TUBB1Q9H4B7 451 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 NOL11Q9H8H0 719 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 CXorf21Q9HAI6 301 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ADAM22Q9P0K1 906 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 AGAP1Q9UPQ3 857 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 K7ERI5 159 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 EML1O00423 815 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 OSBPP22059 807 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 NR4A1P22736 598 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 AP3M2P53677 418 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 USP46P62068 366 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 C11orf91Q3C1V1 193 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SH3BP5LQ7L8J4 393 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SYTL1Q8IYJ3 562 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ZNF75CPQ92670 426 aaPredicted RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 COMMD9Q9P000 198 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ADD1P35611 737 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 SNX7Q9UNH6 387 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 HEATR9A2RTY3 570 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 DDX3XO00571 662 aaKnown RBP eCLIP6.85□□□□□ -1.319e-11■□□□□ 9.6
UBR4-204ENST00000375254 ECE2O60344 883 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ANXA11P50995 505 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 TDGQ13569 410 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 CHI3L2Q15782 390 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 CNPY1Q3B7I2 92 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 EDRF1Q3B7T1 1238 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PLEKHG6Q3KR16 790 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 OTUD7AQ8TE49 926 aaPredicted RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 PHF20Q9BVI0 1012 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PAK5Q9P286 719 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 ITGA2BP08514 1039 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 SCNN1BP51168 640 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 PUM3Q15397 648 aaKnown RBP6.85□□□□□ -1.31
UBR4-204ENST00000375254 PHKG1Q16816 387 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 EPB41L1Q9H4G0 881 aa6.85□□□□□ -1.31
UBR4-204ENST00000375254 RTEL1-TNFRSF6BF6WH68 1400 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SERPINA6P08185 405 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ZNF23P17027 643 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 DRD4P21917 467 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 ARSEP51690 589 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SSTP61278 116 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 SQLEQ14534 574 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 KRT24Q2M2I5 525 aa6.84□□□□□ -1.31
UBR4-204ENST00000375254 FAM162AQ96A26 154 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms