RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 AGAP1Q9UPQ3 857 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 THAP12O43422 761 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 MGRN1O60291 552 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 CNGA2Q16280 664 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 WDR72Q3MJ13 1102 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 TWF2Q6IBS0 349 aaKnown RBP13.99□□□□□ -0.17
A1CF-204ENST00000373997 SERINC5Q86VE9 423 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 PASD1Q8IV76 773 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 EPS8L3Q8TE67 593 aaKnown RBP13.99□□□□□ -0.17
A1CF-204ENST00000373997 PXYLP1Q8TE99 480 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 ZNF653Q96CK0 615 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 SERPINB12Q96P63 405 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 KLK14Q9P0G3 267 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 CHORDC1Q9UHD1 332 aaPredicted RBP13.99□□□□□ -0.17
A1CF-204ENST00000373997 C2CD2Q9Y426 696 aa13.99□□□□□ -0.17
A1CF-204ENST00000373997 TDRD15B5MCY1 1934 aaKnown RBP13.98□□□□□ -0.17
A1CF-204ENST00000373997 CFAP73A6NFT4 308 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 SMIM23A6NLE4 172 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 FSCN2O14926 492 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 CFHP08603 1231 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 SLC8A1P32418 973 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 CLEC16AQ2KHT3 1053 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 UBXN11Q5T124 520 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 CXorf38Q8TB03 319 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 ZMAT2Q96NC0 199 aaKnown RBP13.98□□□□□ -0.17
A1CF-204ENST00000373997 PRMT1Q99873 361 aaKnown RBP13.98□□□□□ -0.17
A1CF-204ENST00000373997 SMYD3Q9H7B4 428 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 CNTN6Q9UQ52 1028 aa13.98□□□□□ -0.17
A1CF-204ENST00000373997 GNRH1P01148 92 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 ITIH2P19823 946 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 THPOP40225 353 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 ZNF132P52740 706 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 NFX1Q12986 1120 aaKnown RBP13.97□□□□□ -0.17
A1CF-204ENST00000373997 ITGA7Q13683 1181 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 PPP1R7Q15435 360 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 ZNF677Q86XU0 584 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 HPDLQ96IR7 371 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 TUBGCP4Q9UGJ1 667 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 ITGA11Q9UKX5 1188 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
A1CF-204ENST00000373997 TCRBV7S2A1N4TA0A589 114 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 CHRNA1P02708 482 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 VIMP08670 466 aaKnown RBP13.97□□□□□ -0.17
A1CF-204ENST00000373997 ACLYP53396 1101 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 CDH8P55286 799 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 CAV1Q03135 178 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 ACAD10Q6JQN1 1059 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 TRPM8Q7Z2W7 1104 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 SLAIN1Q8ND83 568 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 CPA5Q8WXQ8 436 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 C18orf25Q96B23 403 aaPredicted RBP13.97□□□□□ -0.17
A1CF-204ENST00000373997 SENP6Q9GZR1 1112 aaPredicted RBP13.97□□□□□ -0.17
A1CF-204ENST00000373997 SDCBP2Q9H190 292 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 RNF39Q9H2S5 420 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 PLEKHA5Q9HAU0 1116 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 TRMT13Q9NUP7 481 aaKnown RBP13.97□□□□□ -0.17
A1CF-204ENST00000373997 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.97□□□□□ -0.17
A1CF-204ENST00000373997 NOD1Q9Y239 953 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 IPPQ9Y573 584 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 PTCH2Q9Y6C5 1203 aa13.97□□□□□ -0.17
A1CF-204ENST00000373997 GRK4P32298 578 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 YWHAEP62258 255 aaKnown RBP13.96□□□□□ -0.17
A1CF-204ENST00000373997 RBP5P82980 135 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 ORC1Q13415 861 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 RHBDF2Q6PJF5 856 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 EXOC3L1Q86VI1 746 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 SESTD1Q86VW0 696 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 NT5DC4Q86YG4 428 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 GRK7Q8WTQ7 553 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 ELAC2Q9BQ52 826 aaKnown RBP13.96□□□□□ -0.17
A1CF-204ENST00000373997 BCO2Q9BYV7 579 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 CDC42EP4Q9H3Q1 356 aaKnown RBP13.96□□□□□ -0.17
A1CF-204ENST00000373997 HMX1Q9NP08 348 aaPredicted RBP13.96□□□□□ -0.17
A1CF-204ENST00000373997 PTPN22Q9Y2R2 807 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 TRIM17Q9Y577 477 aa13.96□□□□□ -0.17
A1CF-204ENST00000373997 PPEF2O14830 753 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 SNX3O60493 162 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 ATP2C2O75185 946 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 ATICP31939 592 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 SLCO1A2P46721 670 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 ELF3P78545 371 aaPredicted RBP13.96□□□□□ -0.18
A1CF-204ENST00000373997 KRT17Q04695 432 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 MGAT3Q09327 533 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 SGO2Q562F6 1265 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 CCDC63Q8NA47 563 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 SMG8Q8ND04 991 aaKnown RBP13.96□□□□□ -0.18
A1CF-204ENST00000373997 PLCD4Q9BRC7 762 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 CNTN3Q9P232 1028 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 ST3GAL5Q9UNP4 418 aa13.96□□□□□ -0.18
A1CF-204ENST00000373997 TCEA3O75764 348 aa13.95□□□□□ -0.18
A1CF-204ENST00000373997 OAS1P00973 400 aaKnown RBP13.95□□□□□ -0.18
A1CF-204ENST00000373997 UNGP13051 313 aaPredicted RBP13.95□□□□□ -0.18
A1CF-204ENST00000373997 EZRP15311 586 aaKnown RBP13.95□□□□□ -0.18
A1CF-204ENST00000373997 SLC1A1P43005 524 aa13.95□□□□□ -0.18
A1CF-204ENST00000373997 NSFP46459 744 aaKnown RBP13.95□□□□□ -0.18
A1CF-204ENST00000373997 KCNJ1P48048 391 aa13.95□□□□□ -0.18
A1CF-204ENST00000373997 RIPK1Q13546 671 aa13.95□□□□□ -0.18
A1CF-204ENST00000373997 PTK6Q13882 451 aa13.95□□□□□ -0.18
A1CF-204ENST00000373997 ARHGEF6Q15052 776 aa13.95□□□□□ -0.18
A1CF-204ENST00000373997 C2CD6Q53TS8 623 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms