RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 LIMA1Q9UHB6 759 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 MGAT4DA6NG13 374 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 ZBTB39O15060 712 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 CD3EAPO15446 510 aaKnown RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 EYA4O95677 639 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 GYS1P13807 737 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 YWHAQP27348 245 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 GPC1P35052 558 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 ATP2C1P98194 919 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 MAD2L1Q13257 205 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 BARGINQ6ZT62 677 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 ATG16L2Q8NAA4 619 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 ZNF483Q8TF39 744 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 RORBQ92753 470 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 MMADHCQ9H3L0 296 aaPredicted RBP12.88□□□□□ -0.35
TPR-201ENST00000367478 TRPM5Q9NZQ8 1165 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 BTBD7Q9P203 1132 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 GABBR1Q9UBS5 961 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 PCDHB2Q9Y5E7 798 aa12.88□□□□□ -0.35
TPR-201ENST00000367478 NQO1P15559 274 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 S100GP29377 79 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 PSMD4P55036 377 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 MFN2O95140 757 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 CRKLP46109 303 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 TXNRD1Q16881 649 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 PCNX4Q63HM2 1172 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 C4orf33Q8N1A6 199 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 SNRNP27Q8WVK2 155 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 EPB41L4BQ9H329 900 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 POLG2Q9UHN1 485 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 P4HA2O15460 535 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 CSPG5O95196 566 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 FASP25445 335 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 IRAK1P51617 712 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 HEATR4Q86WZ0 1026 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 UTYO14607 1347 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 ANXA6P08133 673 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 CHRM3P20309 590 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 PRKAA2P54646 552 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 DMPKQ09013 629 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 ALFQ53S48 1182 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 LIN54Q6MZP7 749 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 STX12Q86Y82 276 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 EPHX4Q8IUS5 362 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 GTF2A1LQ9UNN4 478 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 ASXL2Q76L83 1435 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 CCDC189A1A4V9 331 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 MCEEQ96PE7 176 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 NT5C1AQ9BXI3 368 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 SH3BP1Q9Y3L3 701 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 TSPAN9O75954 239 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 FAM58BPP0C7Q3 252 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 KCNA6P17658 529 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 TGM2P21980 687 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 YWHABP31946 246 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 PUS7LQ9H0K6 701 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 WHRNQ9P202 907 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 SV2CQ496J9 727 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 TYW3Q6IPR3 259 aaKnown RBP12.87□□□□□ -0.35
TPR-201ENST00000367478 CASP12Q6UXS9 341 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 AHSPQ9NZD4 102 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 VTI1BQ9UEU0 232 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 RABGEF1Q9UJ41 708 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 DGAT1O75907 488 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 SGO1Q5FBB7 561 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 HAUS6Q7Z4H7 955 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 S100A13Q99584 98 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 COMMD9Q9P000 198 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 LNPEPQ9UIQ6 1025 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 IPPQ9Y573 584 aa12.87□□□□□ -0.35
TPR-201ENST00000367478 EFCAB10A6NFE3 127 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 TADA2AO75478 443 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 NOS3P29474 1203 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 SKP1P63208 163 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 PUDPQ08623 228 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 DAPK2Q9UIK4 370 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 ASB14A6NK59 587 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 MAGEB2O15479 319 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 SNUPNO95149 360 aaKnown RBP12.86□□□□□ -0.35
TPR-201ENST00000367478 TARSP26639 723 aaKnown RBP12.86□□□□□ -0.35
TPR-201ENST00000367478 ZRANB3Q5FWF4 1079 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 STARD8Q92502 1023 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 APOL5Q9BWW9 433 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 CRLS1Q9UJA2 301 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 VPS26AO75436 327 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 ARHGDIBP52566 201 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 CDC16Q13042 620 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 NCOA4Q13772 614 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 TIGD7Q6NT04 549 aaPredicted RBP12.86□□□□□ -0.35
TPR-201ENST00000367478 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
TPR-201ENST00000367478 POP5Q969H6 163 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms