RNA–Protein interactions for RNA: ENST00000366814.3

H3F3A-202, Transcript of H3 histone family member 3A, humanhuman

TSL 2 BASIC

Gene H3F3A, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-202ENST00000366814 C18orf8Q96DM3 657 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 MCEEQ96PE7 176 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 TSPAN18Q96SJ8 248 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 FMO2Q99518 471 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 OSMRQ99650 979 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 TRIM51Q9BSJ1 452 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 TRIM7Q9C029 511 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 MTIF3Q9H2K0 278 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 LRRC19Q9H756 370 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 SMYD3Q9H7B4 428 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 PSD3Q9NYI0 1048 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 MTRF1LQ9UGC7 380 aaKnown RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 FAM153AQ9UHL3 310 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 BARX2Q9UMQ3 279 aaPredicted RBP11.49□□□□□ -0.57
H3F3A-202ENST00000366814 NR2E1Q9Y466 385 aa11.49□□□□□ -0.57
H3F3A-202ENST00000366814 GOLGA6CA6NDK9 693 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 GAS8O95995 478 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 GOLGA6DP0CG33 693 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 FGFR4P22455 802 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 PTK7Q13308 1070 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 PPP1R7Q15435 360 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 SPDYCQ5MJ68 293 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 LRRC38Q5VT99 294 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 SCARA3Q6AZY7 606 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 LLGL2Q6P1M3 1020 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 DDX42Q86XP3 938 aaKnown RBP eCLIP11.48□□□□□ -0.57
H3F3A-202ENST00000366814 TSEN2Q8NCE0 465 aaKnown RBP11.48□□□□□ -0.57
H3F3A-202ENST00000366814 IPO4Q8TEX9 1081 aaKnown RBP11.48□□□□□ -0.57
H3F3A-202ENST00000366814 DNAJB3Q8WWF6 145 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 TFAP2BQ92481 460 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 SNX27Q96L92 541 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 HEXIM2Q96MH2 286 aaKnown RBP11.48□□□□□ -0.57
H3F3A-202ENST00000366814 ZIM3Q96PE6 472 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 NT5C1AQ9BXI3 368 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 TRIM31Q9BZY9 425 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 FAM204AQ9H8W3 233 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 DDX56Q9NY93 547 aaKnown RBP11.48□□□□□ -0.57
H3F3A-202ENST00000366814 GOLGA6AQ9NYA3 693 aa11.48□□□□□ -0.57
H3F3A-202ENST00000366814 ZBBXA8MT70 800 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 M0QZ92 97 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 AGPSO00116 658 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 RARAP10276 462 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 ECHS1P30084 290 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 RFC2P35250 354 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 PTGIRP43119 386 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 CDH8P55286 799 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 INCA1Q0VD86 236 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 TRADDQ15628 312 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 ZNF697Q5TEC3 545 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 LRIG3Q6UXM1 1119 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 CPNE8Q86YQ8 564 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 RCOR2Q8IZ40 523 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 LRRC52Q8N7C0 313 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 SLC4A11Q8NBS3 891 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 FAM76AQ8TAV0 307 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 HERVK_113Q902F9 699 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 FAM161BQ96MY7 647 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 SH3GL2Q99962 352 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 SNTG2Q9NY99 539 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 PIN4Q9Y237 131 aaKnown RBP11.47□□□□□ -0.57
H3F3A-202ENST00000366814 MYO9BQ13459 2157 aa11.47□□□□□ -0.57
H3F3A-202ENST00000366814 M0QYV0 167 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 PFKMP08237 780 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 KRT3P12035 628 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 SELPP16109 830 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 HOXA11P31270 313 aaPredicted RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 GJC1P36383 396 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 CRYBB1P53674 252 aaPredicted RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 GSCP56915 257 aaPredicted RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 SNX16P57768 344 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 COPS2P61201 443 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 PSMC1P62191 440 aaKnown RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 CALCOCO2Q13137 446 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 CNGA2Q16280 664 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 HADHQ16836 314 aaKnown RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 TAF2Q6P1X5 1199 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 DENND1BQ6P3S1 775 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 IQCKQ8N0W5 287 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 NIPA2Q8N8Q9 360 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 TET1Q8NFU7 2136 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 UBLCP1Q8WVY7 318 aaPredicted RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 SLCO2A1Q92959 643 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 SDCBP2Q9H190 292 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 METRNQ9UJH8 293 aa11.46□□□□□ -0.57
H3F3A-202ENST00000366814 UBQLN1Q9UMX0 589 aaKnown RBP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.46□□□□□ -0.57
H3F3A-202ENST00000366814 SIGLEC16A6NMB1 481 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 GOLGA8SH3BPF8 625 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 MEFVO15553 781 aaPredicted RBP11.46□□□□□ -0.58
H3F3A-202ENST00000366814 MICAL2O94851 1124 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 RPLP2P05387 115 aaKnown RBP11.46□□□□□ -0.58
H3F3A-202ENST00000366814 CKBP12277 381 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 DESP17661 470 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 RPL7AP62424 266 aaKnown RBP11.46□□□□□ -0.58
H3F3A-202ENST00000366814 ADAM17P78536 824 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 LMNB2Q03252 620 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 HIC1Q14526 733 aa11.46□□□□□ -0.58
H3F3A-202ENST00000366814 ZNF268Q14587 947 aaPredicted RBP11.46□□□□□ -0.58
H3F3A-202ENST00000366814 SIX1Q15475 284 aaPredicted RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms