RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CAPRIN2Q6IMN6 1127 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 CDHR3Q6ZTQ4 885 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 CENPUQ71F23 418 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 ALYREFQ86V81 257 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 AGGF1Q8N302 714 aaeCLIP11.1□□□□□ -0.632e-6■□□□□ 9.2
SMC3-201ENST00000361804 DEPTORQ8TB45 409 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 FAM81BQ96LP2 452 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 ASCC2Q9H1I8 757 aaPredicted RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 CISHQ9NSE2 258 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 CYP39A1Q9NYL5 469 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 SLC9A2Q9UBY0 812 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 HMGXB4Q9UGU5 601 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 NR2E3Q9Y5X4 410 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 DPPA5A6NC42 116 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 SOCS7O14512 581 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 PRPF4O43172 522 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMC3-201ENST00000361804 UGT1A9O60656 530 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 SRGAP2CP0DJJ0 459 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 NEFHP12036 1026 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 CALB2P22676 271 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 PSMA2P25787 234 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 TFAMQ00059 246 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 CNTN2Q02246 1040 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 KPNB1Q14974 876 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 SEPT7Q16181 437 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 PTPN20Q4JDL3 420 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMC3-201ENST00000361804 ENOSF1Q7L5Y1 443 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 USP37Q86T82 979 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 RCOR2Q8IZ40 523 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 UGT1A7Q9HAW7 530 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 UGT1A10Q9HAW8 530 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 UGT1A8Q9HAW9 530 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 PIDD1Q9HB75 910 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 FAM237BA0A1B0GVD1 139 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 WDR46O15213 610 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 HMGCS2P54868 508 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 SLC8A3P57103 927 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 GEMIN4P57678 1058 aaKnown RBP11.1□□□□□ -0.63
SMC3-201ENST00000361804 CES4AQ5XG92 561 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 RINLQ6ZS11 566 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 TMEM192Q8IY95 271 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 NETO2Q8NC67 525 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 NRG4Q8WWG1 115 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
SMC3-201ENST00000361804 C3orf70A6NLC5 250 aaPredicted RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 ABHD2P08910 425 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 IRX4P78413 519 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 FAAP100Q0VG06 881 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 TRIM50Q86XT4 487 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 THNSL1Q8IYQ7 743 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 LRRC71Q8N4P6 559 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 BBOF1Q8ND07 529 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 ATP6V0A1Q93050 837 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 CLPTM1LQ96KA5 538 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 RAB3IPQ96QF0 476 aaPredicted RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 CYLDQ9NQC7 956 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 CYB561D2O14569 222 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 MAGEB2O15479 319 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 LRCH4O75427 683 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 PYGBP11216 843 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 ELK3P41970 407 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 BPIFB4P59827 614 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 TGFB2P61812 414 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 BMPR2Q13873 1038 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 KBTBD12Q3ZCT8 623 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 TREML2Q5T2D2 321 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 ZNF677Q86XU0 584 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 CFAP36Q96G28 342 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 RBM41Q96IZ5 413 aaKnown RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 PIWIL1Q96J94 861 aaKnown RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 XPO7Q9UIA9 1087 aaKnown RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 ACTL7BQ9Y614 415 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 SCINQ9Y6U3 715 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 TCRBV5S1A1TA0A578 114 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 ZBTB42B2RXF5 422 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 KIF1CO43896 1103 aaKnown RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 PSAPP07602 524 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 CCND2P30279 289 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 GMPRP36959 345 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 SNRPFP62306 86 aaKnown RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 MORF4L2Q15014 288 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 CDO1Q16878 200 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 ABHD15Q6UXT9 468 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 RELL1Q8IUW5 271 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 PALM2Q8IXS6 379 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 MZB1Q8WU39 189 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 DCAKDQ8WVC6 231 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 KLRG1Q96E93 195 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 GPATCH2LQ9NWQ4 482 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 FARP1Q9Y4F1 1045 aaPredicted RBP11.09□□□□□ -0.63
SMC3-201ENST00000361804 AFG3L2Q9Y4W6 797 aa11.09□□□□□ -0.63
SMC3-201ENST00000361804 LGR5O75473 907 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 CNMDO75829 334 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 KRT19P08727 400 aa11.08□□□□□ -0.64
SMC3-201ENST00000361804 RCN1Q15293 331 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms