RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 TCEAL5Q5H9L2 206 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 EMILIN2Q9BXX0 1053 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 M0QYV0 167 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 PPP2R1BP30154 601 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 ADORA1P30542 326 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 PRIM2P49643 509 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 DGUOKQ16854 277 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 MLPHQ9BV36 600 aaPredicted RBP13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 CHID1Q9BWS9 393 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 TMCC3Q9ULS5 477 aa13.69□□□□□ -0.22
SRGAP3-201ENST00000360413 O00370 1275 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 IDH3BO43837 385 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PSMB9P28065 219 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 NEDD8Q15843 81 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 DGKKQ5KSL6 1271 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PMF1Q6P1K2 205 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 TAF8Q7Z7C8 310 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 COL23A1Q86Y22 540 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 CLVS1Q8IUQ0 354 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 NOA1Q8NC60 698 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ENGASEQ8NFI3 743 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 MCCC1Q96RQ3 725 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 RAB6BQ9NRW1 208 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ZSWIM5Q9P217 1185 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 TFE3P19532 575 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC16A2P36021 539 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 HARS2P49590 506 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 MTTPP55157 894 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 TRMT5Q32P41 509 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 THOC7Q6I9Y2 204 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 KCTD17Q8N5Z5 321 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 SNX31Q8N9S9 440 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 RNFT2Q96EX2 444 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 MAGED4Q96JG8 741 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 WEE2P0C1S8 567 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 BNC2Q6ZN30 1099 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ZBTB49Q6ZSB9 765 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ARHGEF26Q96DR7 871 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 RGS18Q9NS28 235 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 C2CD2Q9Y426 696 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ERVV-1B6SEH8 477 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 SASH1O94885 1247 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ALOX15P16050 662 aaPredicted RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ATP4AP20648 1035 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 IER5Q5VY09 327 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 KCNA6P17658 529 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 GEMIN4P57678 1058 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 SNRPFP62306 86 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC18A3Q16572 532 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 MUC3BQ9H195 1237 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 RMND5AQ9H871 391 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 WDR41Q9HAD4 459 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 SLC25A13Q9UJS0 675 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 ZNF618Q5T7W0 954 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 USP17L2Q6R6M4 530 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PDCD10Q9BUL8 212 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 WDR19Q8NEZ3 1342 aa13.68□□□□□ -0.22
SRGAP3-201ENST00000360413 PEX5P50542 639 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 KCNMA1Q12791 1236 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 PTRHD1Q6GMV3 140 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 PID1Q7Z2X4 250 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 DGKHQ86XP1 1220 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ADI1Q9BV57 179 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ZBTB5O15062 677 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 UBOX5O94941 541 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 IL18RAPO95256 599 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 POLBP06746 335 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 CHRNB3Q05901 458 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 KLF6Q99612 283 aaPredicted RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 CELF4Q9BZC1 486 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ZBTB1Q9Y2K1 713 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ATP6V1B2P21281 511 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 STK4Q13043 487 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 KDELC2Q7Z4H8 507 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 RAD54LQ92698 747 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 NLNQ9BYT8 704 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 EFCAB1Q9HAE3 211 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 TUFT1Q9NNX1 390 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ENTPD7Q9NQZ7 604 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 PRRG1O14668 218 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 FCGR1AP12314 374 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ALDH1A3P47895 512 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ITGA1P56199 1179 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 POLD3Q15054 466 aaPredicted RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 FAM83EQ2M2I3 478 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ESRP1Q6NXG1 681 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 THUMPD3Q9BV44 507 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 THRAP10827 490 aa13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 QARSP47897 775 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 ALDH6A1Q02252 535 aaKnown RBP13.67□□□□□ -0.22
SRGAP3-201ENST00000360413 PCNX4Q63HM2 1172 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms