RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 MCL1Q07820 350 aa21.45■■□□□ 1.02
COL13A1-202ENST00000357811 TARBP2Q15633 366 aaKnown RBP21.45■■□□□ 1.02
COL13A1-202ENST00000357811 RNF43Q68DV7 783 aa21.45■■□□□ 1.02
COL13A1-202ENST00000357811 RPAINQ86UA6 219 aa21.45■■□□□ 1.02
COL13A1-202ENST00000357811 CCHCR1Q8TD31 782 aa21.45■■□□□ 1.02
COL13A1-202ENST00000357811 ZNF75CPQ92670 426 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-202ENST00000357811 NIFKQ9BYG3 293 aaKnown RBP21.45■■□□□ 1.02
COL13A1-202ENST00000357811 SDCBP2Q9H190 292 aa21.45■■□□□ 1.02
COL13A1-202ENST00000357811 ITGAVP06756 1048 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 NFICP08651 508 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 KDELR1P24390 212 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 GEMIN4P57678 1058 aaKnown RBP21.44■■□□□ 1.02
COL13A1-202ENST00000357811 EIF3EP60228 445 aaKnown RBP21.44■■□□□ 1.02
COL13A1-202ENST00000357811 PLEKHG4Q58EX7 1191 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 C1orf228Q6PIY5 440 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 PIWIL1Q96J94 861 aaKnown RBP21.44■■□□□ 1.02
COL13A1-202ENST00000357811 ACTL7BQ9Y614 415 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 NOP56O00567 594 aaKnown RBP21.44■■□□□ 1.02
COL13A1-202ENST00000357811 RBP3P10745 1247 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 MIPP30301 263 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 OAZ1P54368 228 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 PDK4Q16654 411 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 SPATA18Q8TC71 538 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 NKD2Q969F2 451 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-202ENST00000357811 KLRG1Q96E93 195 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 RNF19AQ9NV58 838 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 GPATCH2LQ9NWQ4 482 aa21.44■■□□□ 1.02
COL13A1-202ENST00000357811 EDF1O60869 148 aaKnown RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 FAM155BO75949 473 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 EPHB2P29323 1055 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 C15orf59Q2T9L4 293 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 TAF1BQ53T94 588 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 MTDHQ86UE4 582 aaKnown RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 PTPRN2Q92932 1015 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 TMEM134Q9H6X4 195 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 NKX1-2Q9UD57 310 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 CPSF3Q9UKF6 684 aaKnown RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 SHOC2Q9UQ13 582 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 DRG1Q9Y295 367 aaKnown RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 TYROBPO43914 113 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 MAFO75444 373 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 SKAP2O75563 359 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 ARL4CP56559 192 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 ATP11AP98196 1134 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 SMAD1Q15797 465 aaKnown RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 RIBC1Q8N443 379 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-202ENST00000357811 RFWD2Q8NHY2 731 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 MAGEC3Q8TD91 643 aa21.43■■□□□ 1.02
COL13A1-202ENST00000357811 F5H423 210 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 M0QYV0 167 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 LSM8O95777 96 aaKnown RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 TNNC2P02585 160 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 ITGB3P05106 788 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 MOGSQ13724 837 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 FAM102AQ5T9C2 384 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 SCYL2Q6P3W7 929 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 LRRC6Q86X45 466 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 ZBTB8OSQ8IWT0 167 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 PPIL6Q8IXY8 311 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 SEPT1Q8WYJ6 367 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 L3MBTL3Q96JM7 780 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 TRIM56Q9BRZ2 755 aaKnown RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 USH1CQ9Y6N9 552 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 IQCF3P0C7M6 154 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 EIF4BP23588 611 aaKnown RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 YWHAGP61981 247 aaKnown RBP eCLIP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 ATF7IP2Q5U623 682 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 LRRC38Q5VT99 294 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 DRICH1Q6PGQ1 229 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 ZPBP2Q6X784 338 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 DDX56Q9NY93 547 aaKnown RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 KCNG1Q9UIX4 513 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 STARD13Q9Y3M8 1113 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 FARP1Q9Y4F1 1045 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 RFC5P40937 340 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 ELK3P41970 407 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 RGS7P49802 495 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 ERFP50548 548 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 GJC2Q5T442 439 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-202ENST00000357811 GADL1Q6ZQY3 521 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 TTC17Q96AE7 1141 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 C15orf41Q9Y2V0 281 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 HEY1Q9Y5J3 304 aa21.42■■□□□ 1.02
COL13A1-202ENST00000357811 C19orf81C9J6K1 198 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 PRPF4O43172 522 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL13A1-202ENST00000357811 RIPK1Q13546 671 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 HADHQ16836 314 aaKnown RBP21.41■■□□□ 1.02
COL13A1-202ENST00000357811 ZNF667Q5HYK9 610 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 FAM160B1Q5W0V3 765 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 DARS2Q6PI48 645 aaKnown RBP21.41■■□□□ 1.02
COL13A1-202ENST00000357811 ATP11CQ8NB49 1132 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 CFAP36Q96G28 342 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 ANKRD36BP1Q96IX9 119 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 PLCD4Q9BRC7 762 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL13A1-202ENST00000357811 SMG5Q9UPR3 1016 aaKnown RBP21.41■■□□□ 1.02
COL13A1-202ENST00000357811 PHIPQ8WWQ0 1821 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 UPP2O95045 317 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 RAD23BP54727 409 aa21.41■■□□□ 1.02
COL13A1-202ENST00000357811 CDH6P55285 790 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms