RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HOXC6P09630 235 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 AGAP9Q5VTM2 703 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 AKT1S1Q96B36 256 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 CNPY3Q9BT09 278 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 THTPAQ9BU02 230 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 SEMA6BQ9H3T3 888 aa12.21□□□□□ -0.46
COL9A1-202ENST00000357250 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.21□□□□□ -0.46
COL9A1-202ENST00000357250 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 KANSL1LA0AUZ9 987 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 F8VZ95 297 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 BRD2P25440 801 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 VHLP40337 213 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 COPAP53621 1224 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 TTLL9Q3SXZ7 439 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 AARS2Q5JTZ9 985 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 C6orf10Q5SRN2 563 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 WLSQ5T9L3 541 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 FAM71DQ8N9W8 422 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 ATP8B4Q8TF62 1192 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 MROH8Q9H579 483 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 ODC1P11926 461 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 GRK2P25098 689 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 TCF7P36402 384 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 NEK2P51955 445 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 KCNK10P57789 538 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 CXCL9Q07325 125 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 MTA1Q13330 715 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 ADRM1Q16186 407 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 ZC3H12BQ5HYM0 836 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 MRNIPQ6NTE8 343 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 MYCBPAPQ8TBZ2 947 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 TEKT4Q8WW24 435 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 PRPF18Q99633 342 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 UBE2OQ9C0C9 1292 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 FAM49BQ9NUQ9 324 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 DPP3Q9NY33 737 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 IFT172Q9UG01 1749 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 NCAM2O15394 837 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 KDM1AO60341 852 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 C6orf222P0C671 652 aaPredicted RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 SARSP49591 514 aaKnown RBP12.2□□□□□ -0.46
COL9A1-202ENST00000357250 TRIP10Q15642 601 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 SYTL3Q4VX76 610 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 SH3GL3Q99963 347 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 SMARCAL1Q9NZC9 954 aa12.2□□□□□ -0.46
COL9A1-202ENST00000357250 SDR42E2A6NKP2 422 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 C5orf58C9J3I9 102 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 AKAP10O43572 662 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 NPTX2P47972 431 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 NLRP9Q7RTR0 991 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PNKPQ96T60 521 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 LRRC40Q9H9A6 602 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 LATS2Q9NRM7 1088 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 DRG1Q9Y295 367 aaKnown RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 CAPN6Q9Y6Q1 641 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 ZMYM2Q9UBW7 1377 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PIK3C2AO00443 1686 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 ATMINO43313 823 aaPredicted RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 CYTH3O43739 400 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 ITGB3P05106 788 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SERPINB8P50452 374 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 BCAT1P54687 386 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 CHI3L2Q15782 390 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 IL31Q6EBC2 164 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 CYP2W1Q8TAV3 490 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 TMA16Q96EY4 203 aaKnown RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 TBCBQ99426 244 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SLC40A1Q9NP59 571 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PDP2Q9P2J9 529 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 AFF4Q9UHB7 1163 aaKnown RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 RSPH10B2B2RC85 870 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 TM9SF1O15321 606 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 ADCY3O60266 1144 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 RSPH10BP0C881 870 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 THRAP10827 490 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 IL1R1P14778 569 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 HARS2P49590 506 aaKnown RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 CCDC15Q0P6D6 951 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 ARHGEF7Q14155 803 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 AGR3Q8TD06 166 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SPIRE2Q8WWL2 714 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 ZNF556Q9HAH1 456 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SHOC2Q9UQ13 582 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 KBTBD13C9JR72 458 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 IGF2BP3O00425 579 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 TGFB3P10600 412 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SEC24CP53992 1094 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PTENP60484 403 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 SKOR1P84550 965 aa12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PTRHD1Q6GMV3 140 aaKnown RBP12.19□□□□□ -0.46
COL9A1-202ENST00000357250 PRPF39Q86UA1 669 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms