RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CDR1P51861 262 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 TWF1Q12792 350 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 VEPH1Q14D04 833 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 LCLAT1Q6UWP7 414 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 SCN4BQ8IWT1 228 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ANKRD52Q8NB46 1076 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 RHOBTB2Q9BYZ6 727 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 PRKD2Q9BZL6 878 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 UBE2ZQ9H832 354 aaPredicted RBP16.48■□□□□ 0.23
TRIM13-201ENST00000356017 DMAP1Q9NPF5 467 aaPredicted RBP16.48■□□□□ 0.23
TRIM13-201ENST00000356017 KRT82Q9NSB4 513 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 CAPN11Q9UMQ6 739 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
TRIM13-201ENST00000356017 ASB3Q9Y575 518 aa16.48■□□□□ 0.23
TRIM13-201ENST00000356017 O00370 1275 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 THAP12O43422 761 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 RFPL2O75678 378 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 AP1G2O75843 785 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 GFPT2O94808 682 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 PNMA6AP0CW24 399 aaPredicted RBP16.47■□□□□ 0.23
TRIM13-201ENST00000356017 PDE6CP51160 858 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 MEA1Q16626 185 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 CES5AQ6NT32 575 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 ITIH5Q86UX2 942 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 ZNF606Q8WXB4 792 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 TFAP2BQ92481 460 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 BAP1Q92560 729 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 SPATA17Q96L03 361 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 C8orf48Q96LL4 319 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 ZNF512Q96ME7 567 aaPredicted RBP16.47■□□□□ 0.23
TRIM13-201ENST00000356017 DUSP16Q9BY84 665 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 CSNK1G1Q9HCP0 422 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 TSPAN16Q9UKR8 245 aa16.47■□□□□ 0.23
TRIM13-201ENST00000356017 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.47■□□□□ 0.23
TRIM13-201ENST00000356017 CYP11B1P15538 503 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 FERP16591 822 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 NPR3P17342 541 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 BRD2P25440 801 aaKnown RBP16.46■□□□□ 0.23
TRIM13-201ENST00000356017 BCAT1P54687 386 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 ZBED6P86452 979 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 DLX2Q07687 328 aaPredicted RBP16.46■□□□□ 0.23
TRIM13-201ENST00000356017 DDR2Q16832 855 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 SYCE2Q6PIF2 218 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 SLC47A2Q86VL8 602 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 MSLNLQ96KJ4 702 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 ADAM7Q9H2U9 754 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 PIDD1Q9HB75 910 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 PNPLA8Q9NP80 782 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 EHD2Q9NZN4 543 aa16.46■□□□□ 0.23
TRIM13-201ENST00000356017 LRRC53A6NM62 1247 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 F8VP50 259 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SOAT2O75908 522 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 GYPCP04921 128 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 ATF6P18850 670 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 KRT9P35527 623 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 BST2Q10589 180 aaKnown RBP16.45■□□□□ 0.22
TRIM13-201ENST00000356017 TAF12Q16514 161 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 GOLGA7BQ2TAP0 167 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SFMBT2Q5VUG0 894 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 TMC5Q6UXY8 1006 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 CLEC20AQ6ZU45 233 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 ZNF677Q86XU0 584 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 C12orf76Q8N812 135 aaPredicted RBP16.45■□□□□ 0.22
TRIM13-201ENST00000356017 CPLX3Q8WVH0 158 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SMG7Q92540 1137 aaKnown RBP16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SYN2Q92777 582 aaPredicted RBP16.45■□□□□ 0.22
TRIM13-201ENST00000356017 UBXN6Q9BZV1 441 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 ACP6Q9NPH0 428 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 AIPL1Q9NZN9 384 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 CD207Q9UJ71 328 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 PLXNA3P51805 1871 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 CCL16O15467 120 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SETSIPP0DME0 302 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 CSH1P0DML2 217 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 CSH2P0DML3 217 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 PTPN2P17706 415 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 KCNA5P22460 613 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 MAP3K7CLP57077 242 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 ATAT1Q5SQI0 421 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 RARS2Q5T160 578 aaKnown RBP16.45■□□□□ 0.22
TRIM13-201ENST00000356017 GPR149Q86SP6 731 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SMRP1Q8NCR6 262 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 EPS8L1Q8TE68 723 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 PSMG2Q969U7 264 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 ZNF707Q96C28 371 aaPredicted RBP16.45■□□□□ 0.22
TRIM13-201ENST00000356017 KCNK16Q96T55 309 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 SMOQ99835 787 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 ZSWIM1Q9BR11 485 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 GRPEL1Q9HAV7 217 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 PCDHGC3Q9UN70 934 aa16.45■□□□□ 0.22
TRIM13-201ENST00000356017 M0QYV0 167 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 MICAL2O94851 1124 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 CASP14P31944 242 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 CACNA2D1P54289 1103 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 ARID5AQ03989 594 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 DENND5BQ6ZUT9 1274 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 TMC6Q7Z403 805 aa16.44■□□□□ 0.22
TRIM13-201ENST00000356017 DNAJB7Q7Z6W7 309 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms