RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 C9orf57Q5W0N0 161 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 TTC19Q6DKK2 380 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 DPH6Q7L8W6 267 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 ALLCQ8N6M5 410 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 EMC1Q8N766 993 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 LENG1Q96BZ8 264 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 MRPL45Q9BRJ2 306 aaKnown RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 STMN4Q9H169 189 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CXCL16Q9H2A7 254 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 ZWILCHQ9H900 591 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 TUBGCP4Q9UGJ1 667 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 GJD2Q9UKL4 321 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 TMEM88BA6NKF7 163 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 ITGAVP06756 1048 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 PFKMP08237 780 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 GPD1P21695 349 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 IL1R2P27930 398 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 LSP1P33241 339 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 PCK1P35558 622 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CHKAP35790 457 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 ZNF143P52747 638 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 GUCY1A3Q02108 690 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 XKR4Q5GH76 650 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 OR6B2Q6IFH4 312 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 HIBCHQ6NVY1 386 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 RGMBQ6NW40 437 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 IFNL1Q8IU54 200 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CMASQ8NFW8 434 aaPredicted RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 BCAS4Q8TDM0 211 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 PPP1R13LQ8WUF5 828 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CNPY3Q9BT09 278 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 DNAI2Q9GZS0 605 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 NXF3Q9H4D5 531 aaKnown RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 CNOT10Q9H9A5 744 aaKnown RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 ZFYVE28Q9HCC9 887 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 SLC12A6Q9UHW9 1150 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
SAMM50-201ENST00000350028 HES2Q9Y543 173 aa17.55■□□□□ 0.4
SAMM50-201ENST00000350028 PDCD11Q14690 1871 aaKnown RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 TLDC2A0PJX2 215 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 PPEF2O14830 753 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 RGS16O15492 202 aaPredicted RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 KPNA6O60684 536 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 TRUB2O95900 331 aaKnown RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 AGTP01019 485 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 KCNE1P15382 129 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 MIPP30301 263 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 VPS41P49754 854 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 IRX5P78411 483 aaPredicted RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 BEX3Q00994 111 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 OASLQ15646 514 aaKnown RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 SKIDA1Q1XH10 827 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 PKDCCQ504Y2 493 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 ARHGAP17Q68EM7 881 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 BBS12Q6ZW61 710 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 RELL1Q8IUW5 271 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 SLC35B2Q8TB61 432 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 C18orf25Q96B23 403 aaPredicted RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 ACSF2Q96CM8 615 aaPredicted RBP17.54■□□□□ 0.4
SAMM50-201ENST00000350028 ZNF560Q96MR9 790 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 ZIC5Q96T25 663 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 EPN3Q9H201 632 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 LRRC4CQ9HCJ2 640 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 HESX1Q9UBX0 185 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 SCN1AP35498 2009 aa17.54■□□□□ 0.4
SAMM50-201ENST00000350028 PIRO00625 290 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 DNALI1O14645 258 aaPredicted RBP17.53■□□□□ 0.4
SAMM50-201ENST00000350028 RASGRF2O14827 1237 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 TTC4O95801 387 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 HOXC8P31273 242 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 PNPLA4P41247 253 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 ZNF200P98182 395 aaPredicted RBP17.53■□□□□ 0.4
SAMM50-201ENST00000350028 PTGISQ16647 500 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 FSCN1Q16658 493 aaKnown RBP17.53■□□□□ 0.4
SAMM50-201ENST00000350028 UBXN11Q5T124 520 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 PPP1R26Q5T8A7 1209 aaPredicted RBP17.53■□□□□ 0.4
SAMM50-201ENST00000350028 FAM183BPQ6ZVS7 135 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 ACOT1Q86TX2 421 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 STK32AQ8WU08 396 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 APOL6Q9BWW8 343 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 SLC4A5Q9BY07 1137 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 USP18Q9UMW8 372 aa17.53■□□□□ 0.4
SAMM50-201ENST00000350028 SMIM28A0A1B0GU29 152 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 C2CD4BA6NLJ0 364 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 E5RJQ4 531 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 TNPO2O14787 897 aaKnown RBP17.52■□□□□ 0.4
SAMM50-201ENST00000350028 SLC10A3P09131 477 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 P3H1Q32P28 736 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 GLRA4Q5JXX5 417 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 MFSD5Q6N075 450 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 FOXR1Q6PIV2 292 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 C7orf31Q8N865 590 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 C12orf29Q8N999 325 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 KCTD6Q8NC69 237 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 OR6B3Q8NGW1 331 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 TMEM40Q8WWA1 233 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 RXFP2Q8WXD0 754 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 NCAPGQ9BPX3 1015 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 PCSK1NQ9UHG2 260 aa17.52■□□□□ 0.4
SAMM50-201ENST00000350028 DPYSL4O14531 572 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms