RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 CYTH2Q99418 400 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 FGFBP2Q9BYJ0 223 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 AFF4Q9UHB7 1163 aaKnown RBP11.35□□□□□ -0.59
CLCN6-202ENST00000346436 FGBP02675 491 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 HIPK4Q8NE63 616 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 CIPCQ9C0C6 399 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 UBA6A0AVT1 1052 aaPredicted RBP11.35□□□□□ -0.59
CLCN6-202ENST00000346436 FSTL1Q12841 308 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 SEZ6Q53EL9 994 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 ZNF438Q7Z4V0 828 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 OR6P1Q8NGX9 317 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 MTMR9Q96QG7 549 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 KLF6Q99612 283 aaPredicted RBP11.35□□□□□ -0.59
CLCN6-202ENST00000346436 IKZF4Q9H2S9 585 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 SHMT1P34896 483 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 ITGA8P53708 1063 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 TWF1Q12792 350 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 LBRQ14739 615 aaKnown RBP11.35□□□□□ -0.59
CLCN6-202ENST00000346436 AGBL2Q5U5Z8 902 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 NOP53Q9NZM5 478 aaKnown RBP11.35□□□□□ -0.59
CLCN6-202ENST00000346436 TMEM150BA6NC51 233 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 ZNF263O14978 683 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 OPHN1O60890 802 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 TMEM119Q4V9L6 283 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 POTEAQ6S8J7 498 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 SLC51AQ86UW1 340 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 HS6ST3Q8IZP7 471 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 CAVIN3Q969G5 261 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 KCNH7Q9NS40 1196 aa11.35□□□□□ -0.59
CLCN6-202ENST00000346436 TISP43B9A030 160 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 F8VZ95 297 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 AGTP01019 485 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 SOX10P56693 466 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 SPATA21Q7Z572 469 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 CBWD2Q8IUF1 395 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 RHOT1Q8IXI2 618 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 GMCL1P1Q8NEA9 526 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 DDI1Q8WTU0 396 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 EXT2Q93063 718 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ATXN3LQ9H3M9 355 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 PCDHB5Q9Y5E4 795 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ADCY6O43306 1168 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ASS1P00966 412 aaKnown RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 DEUP1Q05D60 604 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ZNF284Q2VY69 593 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 AHCYL2Q96HN2 611 aaKnown RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 GBP5Q96PP8 586 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 SERPIND1P05546 499 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 PDGFRBP09619 1106 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 RAB30Q15771 203 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 DCAF6Q58WW2 860 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 LRRC55Q6ZSA7 311 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ZC3H18Q86VM9 953 aaKnown RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 PPHLN1Q8NEY8 458 aaKnown RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 HAS1Q92839 578 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 LRRC37BQ96QE4 947 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 RBM15Q96T37 977 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 TINF2Q9BSI4 451 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 DCLK3Q9C098 648 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ZFP69BQ9UJL9 534 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 FBXO10Q9UK96 956 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 FAM47DPA6NHR8 397 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 GNGT2O14610 69 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 POMCP01189 267 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ESRRAP11474 423 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 IL1R1P14778 569 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 COILP38432 576 aaPredicted RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 RGS4P49798 205 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 MAPK7Q13164 816 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 GMCL1Q96IK5 515 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 P2RX7Q99572 595 aaKnown RBP11.34□□□□□ -0.59
CLCN6-202ENST00000346436 NDEL1Q9GZM8 345 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 GAKO14976 1311 aa11.34□□□□□ -0.59
CLCN6-202ENST00000346436 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 CFAP69A5D8W1 941 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 C3orf70A6NLC5 250 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 EML1O00423 815 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 FGF19O95750 216 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 VGLL4Q14135 290 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 GRIK4Q16099 956 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 ANKS6Q68DC2 871 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 SLC47A2Q86VL8 602 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 CINPQ9BW66 212 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 OXCT2Q9BYC2 517 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 DDX3XO00571 662 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLCN6-202ENST00000346436 SMIM24O75264 130 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 CALCAP01258 141 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 GHRP10912 638 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 CENPCQ03188 943 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 NCOA4Q13772 614 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 BAP1Q92560 729 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 RIPOR3Q96MK2 946 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 SENP7Q9BQF6 1050 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 GPR63Q9BZJ6 419 aa11.33□□□□□ -0.6
CLCN6-202ENST00000346436 SEMA4AQ9H3S1 761 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms