RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 CCDC134Q9H6E4 229 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.79□□□□□ -0.04
PCDH8-201ENST00000338862 FEM1BQ9UK73 627 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 ADGRA3Q8IWK6 1321 aa14.79□□□□□ -0.04
PCDH8-201ENST00000338862 PSMG1O95456 288 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 CST3P01034 146 aaPredicted RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 PSAPP07602 524 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 SLC15A2Q16348 729 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 PLEKHG4Q58EX7 1191 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 C4orf50Q6ZRC1 276 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 NLGN1Q8N2Q7 840 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 RAB3IL1Q8TBN0 382 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 IL1RAPL1Q9NZN1 696 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 ANGPTL2Q9UKU9 493 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 MRPL42Q9Y6G3 142 aaKnown RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 SMCHD1A6NHR9 2005 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 GSC2O15499 205 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 SNUPNO95149 360 aaKnown RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 LMNAP02545 664 aaKnown RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 KCNA4P22459 653 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 RPL10AP62906 217 aaKnown RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 KRT76Q01546 638 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 ROR1Q01973 937 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 TTLL6Q8N841 843 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 E2F7Q96AV8 911 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 ADAMTSL3P82987 1691 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 CCDC189A1A4V9 331 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 PRPSAP2O60256 369 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 WNT7BP56706 349 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 NOMO3P69849 1222 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 SLC34A1Q06495 639 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 CUL3Q13618 768 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 DACT2Q5SW24 774 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 CES3Q6UWW8 571 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 NME8Q8N427 588 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 JOSD2Q8TAC2 188 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 SLC7A6OSQ96CW6 309 aaPredicted RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 OXNAD1Q96HP4 312 aaPredicted RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 MMP19Q99542 508 aa14.78□□□□□ -0.04
PCDH8-201ENST00000338862 ZNF70Q9UC06 446 aaPredicted RBP14.78□□□□□ -0.04
PCDH8-201ENST00000338862 CALB1P05937 261 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 ASNSP08243 561 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 NEK3P51956 506 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 JAK3P52333 1124 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 COG7P83436 770 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 MORF4L2Q15014 288 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 PCGF5Q86SE9 256 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 PPP4R1Q8TF05 950 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 C10orf82Q8WW14 230 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 AGAP3Q96P47 875 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 SRPK1Q96SB4 655 aaKnown RBP14.77□□□□□ -0.04
PCDH8-201ENST00000338862 UNKQ9C0B0 810 aaKnown RBP14.77□□□□□ -0.04
PCDH8-201ENST00000338862 RPAP3Q9H6T3 665 aaPredicted RBP14.77□□□□□ -0.04
PCDH8-201ENST00000338862 APOBEC3GQ9HC16 384 aaKnown RBP14.77□□□□□ -0.04
PCDH8-201ENST00000338862 JPH1Q9HDC5 661 aaPredicted RBP14.77□□□□□ -0.04
PCDH8-201ENST00000338862 CISHQ9NSE2 258 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 AK5Q9Y6K8 562 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 PLCH1Q4KWH8 1693 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 IRS2Q9Y4H2 1338 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 UTRNP46939 3433 aa14.77□□□□□ -0.04
PCDH8-201ENST00000338862 RHBDF2Q6PJF5 856 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 ENOSF1Q7L5Y1 443 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 SCUBE1Q8IWY4 988 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 MCPH1Q8NEM0 835 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 MOV10L1Q9BXT6 1211 aaKnown RBP14.77□□□□□ -0.05
PCDH8-201ENST00000338862 TAS2R1Q9NYW7 299 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 POLIQ9UNA4 740 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 NOP56O00567 594 aaKnown RBP14.77□□□□□ -0.05
PCDH8-201ENST00000338862 FGFR1P11362 822 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 SP100P23497 879 aaPredicted RBP14.77□□□□□ -0.05
PCDH8-201ENST00000338862 AP2B1P63010 937 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 DEUP1Q05D60 604 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 EMC2Q15006 297 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 CRY2Q49AN0 593 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 PPP1R15BQ5SWA1 713 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 TMEM63BQ5T3F8 832 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 SPATA24Q86W54 205 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 GALNT4Q8N4A0 578 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 DCLK2Q8N568 766 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 RNF149Q8NC42 400 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 MIPEPQ99797 713 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 MYPNQ86TC9 1320 aa14.77□□□□□ -0.05
PCDH8-201ENST00000338862 EXTL3O43909 919 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 LYPLA1O75608 230 aaPredicted RBP14.76□□□□□ -0.05
PCDH8-201ENST00000338862 TNNC2P02585 160 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 BCAR1P56945 870 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 SLC45A4Q5BKX6 768 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 MAP4K3Q8IVH8 894 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 CCDC60Q8IWA6 550 aaPredicted RBP14.76□□□□□ -0.05
PCDH8-201ENST00000338862 RIBC1Q8N443 379 aaPredicted RBP14.76□□□□□ -0.05
PCDH8-201ENST00000338862 ALLCQ8N6M5 410 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 GSTCDQ8NEC7 633 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 ITGB4P16144 1822 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 GOLGA8QA0A0J9YX86 632 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 GOLGA8OA6NCC3 632 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 GOLGA8NF8WBI6 632 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 SLC26A4O43511 780 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 UGT1A9O60656 530 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 PGM3O95394 542 aa14.76□□□□□ -0.05
PCDH8-201ENST00000338862 T-ENOLP0DO92 83 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms