RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 FGD5Q6ZNL6 1462 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 SOWAHDA6NJG2 315 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 GMPSP49915 693 aaPredicted RBP13.14□□□□□ -0.31
KPNA4-201ENST00000334256 PRKAG1P54619 331 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 PHF19Q5T6S3 580 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 TYW3Q6IPR3 259 aaKnown RBP13.14□□□□□ -0.31
KPNA4-201ENST00000334256 RASGEF1AQ8N9B8 481 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 PCDHGA6Q9Y5G7 932 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
KPNA4-201ENST00000334256 IGSF1Q8N6C5 1336 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 GTF2A2P52657 109 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 CDH6P55285 790 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 PER3P56645 1201 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.14□□□□□ -0.31
KPNA4-201ENST00000334256 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 ISLR2Q6UXK2 745 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 UBA3Q8TBC4 463 aa13.14□□□□□ -0.31
KPNA4-201ENST00000334256 CCDC177Q9NQR7 707 aaPredicted RBP13.14□□□□□ -0.31
KPNA4-201ENST00000334256 IL1BP01584 269 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 GRK4P32298 578 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ACOT2P49753 483 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MLLT1Q03111 559 aaPredicted RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 STX4Q12846 297 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PPP1R15BQ5SWA1 713 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 TMEM179Q6ZVK1 233 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 SLC13A5Q86YT5 568 aaPredicted RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 TLE6Q9H808 572 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ARHGEF38Q9NXL2 777 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.13□□□□□ -0.314e-7■■■■□ 20.1
KPNA4-201ENST00000334256 PLEKHG2Q9H7P9 1386 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 F5H5T6 163 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 TGM3Q08188 693 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ERMARDQ5T6L9 678 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 RSBN1Q5VWQ0 802 aaPredicted RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PTPRHQ9HD43 1115 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ZNF335Q9H4Z2 1342 aaPredicted RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 C15orf38-AP3S2A0A0A6YYH1 394 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 NCAM2O15394 837 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 SEMA3DO95025 777 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ITPKBP27987 946 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 CCT3P49368 545 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PTPN20Q4JDL3 420 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 EFCAB3Q8N7B9 438 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MCOLN3Q8TDD5 553 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 SEC16BQ96JE7 1060 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ANGPT2O15123 496 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PMPCBO75439 489 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MTA2O94776 668 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 CXCR2P25025 360 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PMS2P54278 862 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 FAM129CQ86XR2 697 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PDIK1LQ8N165 341 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 LRRN4CLQ8ND94 238 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MTFMTQ96DP5 389 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 TBATAQ96M53 351 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 SPATA9Q9BWV2 254 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 RPS6KA6Q9UK32 745 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 OR7A10O76100 309 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 PCP11498 1178 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 JAK3P52333 1124 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 CAPZA1P52907 286 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 ZNF57Q68EA5 555 aaPredicted RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MRPS23Q9Y3D9 190 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 FAM227AF5H4B4 570 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 CBX4O00257 560 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 CNPP09543 421 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 MSH3P20585 1137 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 IRS2Q9Y4H2 1338 aa13.13□□□□□ -0.31
KPNA4-201ENST00000334256 S100A9P06702 114 aaKnown RBP13.13□□□□□ -0.31
KPNA4-201ENST00000334256 KPNA7A9QM74 516 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 ZNF618Q5T7W0 954 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 FBXL19Q6PCT2 694 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 FMO2Q99518 471 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 FAM25EA8MYX2 175 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 AIM2O14862 343 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 BBS4Q96RK4 519 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 MXD3Q9BW11 206 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
KPNA4-201ENST00000334256 GPR182O15218 404 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 SCN2BO60939 215 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 NCK1P16333 377 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 SYN1P17600 705 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 ZNF211Q13398 564 aaPredicted RBP13.12□□□□□ -0.31
KPNA4-201ENST00000334256 CLCA4Q14CN2 919 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 PROSER1Q86XN7 944 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 VAV3Q9UKW4 847 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 EPN1Q9Y6I3 576 aaPredicted RBP13.12□□□□□ -0.31
KPNA4-201ENST00000334256 TPP2P29144 1249 aaPredicted RBP13.12□□□□□ -0.31
KPNA4-201ENST00000334256 SP3Q02447 781 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 PTPRN2Q92932 1015 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 RAD21L1Q9H4I0 556 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 PFKFB1P16118 471 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 CENPCQ03188 943 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 DUOXA2Q1HG44 320 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 LRRC49Q8IUZ0 686 aa13.12□□□□□ -0.31
KPNA4-201ENST00000334256 SNX24Q9Y343 169 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms