RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DCAKDQ8WVC6 231 aa10.11□□□□□ -0.79
PTPRA-202ENST00000318266 MCEEQ96PE7 176 aa10.11□□□□□ -0.79
PTPRA-202ENST00000318266 IWS1Q96ST2 819 aa10.11□□□□□ -0.79
PTPRA-202ENST00000318266 ZWILCHQ9H900 591 aa10.11□□□□□ -0.79
PTPRA-202ENST00000318266 AGTPBP1Q9UPW5 1226 aa10.11□□□□□ -0.79
PTPRA-202ENST00000318266 TM9SF1O15321 606 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 AVILO75366 819 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 INHBAP08476 426 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 POLR2MP0CAP2 368 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 PEX2P28328 305 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ECE1P42892 770 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 RARRES1P49788 294 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 GPC3P51654 580 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 MED21Q13503 144 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 PEX6Q13608 980 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 NCOA4Q13772 614 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ADGRD1Q6QNK2 874 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 IGDCC3Q8IVU1 814 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 OR6Y1Q8NGX8 325 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 FAM81BQ96LP2 452 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 CCDC17Q96LX7 622 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 FOXP3Q9BZS1 431 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 MMADHCQ9H3L0 296 aaPredicted RBP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 AVENQ9NQS1 362 aaPredicted RBP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 CHCHD3Q9NX63 227 aaKnown RBP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 G3V3G9 751 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 I3L4J1 428 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 RPS6KA4O75676 772 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 TMEM63AO94886 807 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 TOP3BO95985 862 aaKnown RBP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 TNNI1P19237 187 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 SERPINB6P35237 376 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 VCPP55072 806 aaKnown RBP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ACTR3P61158 418 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 PDE1BQ01064 536 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 BST1Q10588 318 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 BMPR2Q13873 1038 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 MYBPC3Q14896 1274 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 HSF5Q4G112 596 aaPredicted RBP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ZNF394Q53GI3 561 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 RALGPS1Q5JS13 557 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 DCAF8Q5TAQ9 597 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 SPOCD1Q6ZMY3 1216 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ARHGAP18Q8N392 663 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 NAT14Q8WUY8 206 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 CPT1BQ92523 772 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 CFAP36Q96G28 342 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 EBF4Q9BQW3 602 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 WDR11Q9BZH6 1224 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ACSS3Q9H6R3 686 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ATXN10Q9UBB4 475 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 PACSIN3Q9UKS6 424 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 SHOC2Q9UQ13 582 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 PCDHB4Q9Y5E5 795 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
PTPRA-202ENST00000318266 ZNF862O60290 1169 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 DNAJC6O75061 913 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TM7SF2O76062 418 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 VAV1P15498 845 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 KRT72Q14CN4 511 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 CHI3L2Q15782 390 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 SMAD1Q15797 465 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TRMT5Q32P41 509 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 GRAMD1BQ3KR37 738 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 RC3H1Q5TC82 1133 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 DCUN1D2Q6PH85 259 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PPM1NQ8N819 430 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 ACTL9Q8TC94 416 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 MZB1Q8WU39 189 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 ABTB1Q969K4 478 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PPP2R3CQ969Q6 453 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PHF12Q96QT6 1004 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 NYAP2Q9P242 653 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 COPEO14579 308 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 HNRNPDLO14979 420 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 C6orf222P0C671 652 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 FAM200BP0CF97 657 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 GNA15P30679 374 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 ELK3P41970 407 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 RAP1GDS1P52306 607 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 BTKQ06187 659 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 LSAMPQ13449 338 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 MYBPC2Q14324 1141 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 TRIP10Q15642 601 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 ABCB5Q2M3G0 1257 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 KLHL38Q2WGJ6 581 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 MMEL1Q495T6 779 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 CES4AQ5XG92 561 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 APOBEC3HQ6NTF7 200 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 NET1Q7Z628 596 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 SESTD1Q86VW0 696 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 MYLK4Q86YV6 388 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 RSAD2Q8WXG1 361 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 DTNBP1Q96EV8 351 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 SRPK1Q96SB4 655 aaKnown RBP10.09□□□□□ -0.79
PTPRA-202ENST00000318266 PICK1Q9NRD5 415 aa10.09□□□□□ -0.79
PTPRA-202ENST00000318266 DNAAF2Q9NVR5 837 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms