RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 ARHGAP17Q68EM7 881 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 SPECC1LQ69YQ0 1117 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 SCN4BQ8IWT1 228 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 STKLD1Q8NE28 680 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 CPLX3Q8WVH0 158 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 HLA-CQ95604 372 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 ZNF707Q96C28 371 aaPredicted RBP13.67□□□□□ -0.22
APTX-201ENST00000309615 KCNK16Q96T55 309 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 NUP58Q9BVL2 599 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
APTX-201ENST00000309615 ATP8B3O60423 1300 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 SPTBN5Q9NRC6 3674 aaKnown RBP13.66□□□□□ -0.22
APTX-201ENST00000309615 F8VP50 259 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 AP1G2O75843 785 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 LRG1P02750 347 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 GYPCP04921 128 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 HNRNPA1P09651 372 aaKnown RBP eCLIP13.66□□□□□ -0.22
APTX-201ENST00000309615 HOXA9P31269 272 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 STAT1P42224 750 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 PTK2Q05397 1052 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 GOLGA7BQ2TAP0 167 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 RTL10Q7L3V2 364 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 ZNF606Q8WXB4 792 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 SMOQ99835 787 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 PRKD2Q9BZL6 878 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 S1PR5Q9H228 398 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
APTX-201ENST00000309615 MTCL1Q9Y4B5 1905 aaKnown RBP13.66□□□□□ -0.22
APTX-201ENST00000309615 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 THAP12O43422 761 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 FAM200BP0CF97 657 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 MAP3K7CLP57077 242 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 ARID5AQ03989 594 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CNGA2Q16280 664 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 SMYD5Q6GMV2 418 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 LCLAT1Q6UWP7 414 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CLEC20AQ6ZU45 233 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 TTC30AQ86WT1 665 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 ZMIZ2Q8NF64 920 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
APTX-201ENST00000309615 UBA3Q8TBC4 463 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 GIPC2Q8TF65 315 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.65□□□□□ -0.22
APTX-201ENST00000309615 A0A1W2PQJ5 194 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 TRIM66O15016 1216 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 MICAL2O94851 1124 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 PAPLNO95428 1278 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CFHP08603 1231 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CYP11B1P15538 503 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 NPR3P17342 541 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 EPHB3P54753 998 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 RPL10AP62906 217 aaKnown RBP13.65□□□□□ -0.22
APTX-201ENST00000309615 ANKRD52Q8NB46 1076 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 SMRP1Q8NCR6 262 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 SMG7Q92540 1137 aaKnown RBP13.65□□□□□ -0.22
APTX-201ENST00000309615 MRFAP1L1Q96HT8 127 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 C8orf48Q96LL4 319 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 DUSP16Q9BY84 665 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 ADAM7Q9H2U9 754 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CSNK1G1Q9HCP0 422 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 DMAP1Q9NPF5 467 aaPredicted RBP13.65□□□□□ -0.22
APTX-201ENST00000309615 HCFC1R1Q9NWW0 138 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CD207Q9UJ71 328 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 MYO6Q9UM54 1294 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 CAPN11Q9UMQ6 739 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.65□□□□□ -0.22
APTX-201ENST00000309615 PTPRDP23468 1912 aa13.65□□□□□ -0.22
APTX-201ENST00000309615 TULP2O00295 520 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 XYLBO75191 536 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 ANXA13P27216 316 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 CASP14P31944 242 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 BPIFB4P59827 614 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 TFF2Q03403 129 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 PLD1Q13393 1074 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 MTMR3Q13615 1198 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 STILQ15468 1287 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 E4F1Q66K89 784 aaPredicted RBP13.64□□□□□ -0.23
APTX-201ENST00000309615 GPR149Q86SP6 731 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 NOP9Q86U38 636 aaKnown RBP13.64□□□□□ -0.23
APTX-201ENST00000309615 EPS8L1Q8TE68 723 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 COG5Q9UP83 839 aa13.64□□□□□ -0.23
APTX-201ENST00000309615 GOLGA6L3A6NEY3 463 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 M0QYV0 167 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 MED7O43513 233 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 PDE6CP51160 858 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 BCAT1P54687 386 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 ITIH3Q06033 890 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 PDE4CQ08493 712 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 TAF3Q5VWG9 929 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 DENND1BQ6P3S1 775 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 TMC6Q7Z403 805 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
APTX-201ENST00000309615 ELMOD1Q8N336 334 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 SLC20A1Q8WUM9 679 aa13.63□□□□□ -0.23
APTX-201ENST00000309615 DDX1Q92499 740 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms