RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 SLIT3O75094 1523 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 GRID2IPA4D2P6 1211 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 BDNFP23560 247 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 RHOAP61586 193 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 AGR3Q8TD06 166 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 PPP1R36Q96LQ0 422 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 MRPS23Q9Y3D9 190 aaKnown RBP11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 SF3B1O75533 1304 aaKnown RBP eCLIP11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 UMODL1Q5DID0 1318 aa11.15□□□□□ -0.62
SYNPO2-201ENST00000307142 TRAV19A0A0A6YYK7 116 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 TBC1D3BA6NDS4 549 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 CCDC130P13994 396 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 SCNN1GP51170 649 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 ARHGDIAP52565 204 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 TBX4P57082 545 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 PHKG1Q16816 387 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 ZNF284Q2VY69 593 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 PHACTR4Q8IZ21 702 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 CCDC197Q8NCU1 140 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 FBXO10Q9UK96 956 aa11.15□□□□□ -0.63
SYNPO2-201ENST00000307142 SLITRK3O94933 977 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 INHAP05111 366 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 RARRES1P49788 294 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 NDST1P52848 882 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 MKRN4PQ13434 485 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 TIGD7Q6NT04 549 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 MKL1Q969V6 931 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 ASAH2Q9NR71 780 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 BAIAP2L1Q9UHR4 511 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 FARP2O94887 1054 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 SLURP2P0DP57 97 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 TPGS1Q6ZTW0 290 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CCDC60Q8IWA6 550 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 MS4A14Q96JA4 679 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CELF4Q9BZC1 486 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 FBXL5Q9UKA1 691 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 BARX2Q9UMQ3 279 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 STX7O15400 261 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 F9P00740 461 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 PNMA6AP0CW24 399 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 WDR75Q8IWA0 830 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 TRIM15Q9C019 465 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CNOT10Q9H9A5 744 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CYP3A43Q9HB55 503 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 SPG21Q9NZD8 308 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 TRIM33Q9UPN9 1127 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 PON1P27169 355 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 MZF1P28698 734 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 NNTQ13423 1086 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CHP1Q99653 195 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 ACKR2O00590 384 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 MTSS1O43312 755 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 PPIGQ13427 754 aaKnown RBP eCLIP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 C16orf59Q7L2K0 433 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 LRRC43Q8N309 656 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 BCAS4Q8TDM0 211 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 AHCYL2Q96HN2 611 aaKnown RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 ST3GAL5Q9UNP4 418 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 MYOM1P52179 1685 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 DIAPH2O60879 1101 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CTCFP49711 727 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 UROC1Q96N76 676 aa11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 DMAP1Q9NPF5 467 aaPredicted RBP11.14□□□□□ -0.63
SYNPO2-201ENST00000307142 CST8O60676 142 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 NPM3O75607 178 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 MMP3P08254 477 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 POLR2EP19388 210 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PKN1Q16512 942 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 FAM172AQ8WUF8 416 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 TLE6Q9H808 572 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ANXA9O76027 345 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ADH1AP07327 375 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ERAP2Q6P179 960 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 TACO1Q9BSH4 297 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ELOVL4Q9GZR5 314 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 APOBEC2Q9Y235 224 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 MRC1P22897 1456 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 A0A0G2JND7 137 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 APLP1P51693 650 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 BYSLQ13895 437 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 USP10Q14694 798 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 NAB2Q15742 525 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 C2CD6Q53TS8 623 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PPTC7Q8NI37 304 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 EFHD1Q9BUP0 239 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ASTN2O75129 1339 aaPredicted RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ADGRA2Q96PE1 1338 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ZBTB39O15060 712 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 CA12O43570 354 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 ATP1A1P05023 1023 aaKnown RBP11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 CCR1P32246 355 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 PRR23CQ6ZRP0 262 aa11.13□□□□□ -0.63
SYNPO2-201ENST00000307142 TFAP2DQ7Z6R9 452 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms