RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 SLC9A2Q9UBY0 812 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 ROBO1Q9Y6N7 1651 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 NDC80O14777 642 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 FAM155BO75949 473 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 MAP3K6O95382 1288 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 CDK7P50613 346 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 ATXN3P54252 364 aaPredicted RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 NRLP54845 237 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TCEAL1Q15170 157 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TMEM132AQ24JP5 1023 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 MSS51Q4VC12 460 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 CMPK2Q5EBM0 449 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 EFHC2Q5JST6 749 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TCHHL1Q5QJ38 904 aaPredicted RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 RNASEH2BQ5TBB1 312 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 WDR75Q8IWA0 830 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TLE6Q9H808 572 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 PCDH9Q9HC56 1237 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 SLC7A8Q9UHI5 535 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 KBTBD13C9JR72 458 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 CYB561D2O14569 222 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 MROH9Q5TGP6 573 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 SCARA5Q6ZMJ2 495 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 RAPH1Q70E73 1250 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 ENOSF1Q7L5Y1 443 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 SATL1Q86VE3 508 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TRIM42Q8IWZ5 723 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 GPD1LQ8N335 351 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 PRPF31Q8WWY3 499 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 DDX1Q92499 740 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 MKL1Q969V6 931 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 APOPT1Q96IL0 206 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 GCNAQ96QF7 691 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 PHACTR1Q9C0D0 580 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 ACSS3Q9H6R3 686 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 PACSIN3Q9UKS6 424 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 CCPG1Q9ULG6 757 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 APOBEC2Q9Y235 224 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 RNASEH1O60930 286 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 BBOX1O75936 387 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 SERPINB2P05120 415 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 HNRNPCP07910 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 RBP3P10745 1247 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 UNGP13051 313 aaPredicted RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 GYS1P13807 737 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 NPTX2P47972 431 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 SH3BGRP55822 239 aaPredicted RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 EIF3EP60228 445 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 USP46P62068 366 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 HADHQ16836 314 aaKnown RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 BSPRYQ5W0U4 402 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 KCTD17Q8N5Z5 321 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 BANPQ8N9N5 519 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 GDPD5Q8WTR4 605 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 CRYGNQ8WXF5 182 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 SERAC1Q96JX3 654 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 PANX3Q96QZ0 392 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 MMADHCQ9H3L0 296 aaPredicted RBP11.92□□□□□ -0.5
TRUB1-201ENST00000298746 OCEL1Q9H607 264 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 FBXO28Q9NVF7 368 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 EURLQ9NYK6 297 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 PLIN4Q96Q06 1357 aa11.92□□□□□ -0.5
TRUB1-201ENST00000298746 OR6B1O95007 311 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 C6orf222P0C671 652 aaPredicted RBP11.91□□□□□ -0.5
TRUB1-201ENST00000298746 VAV1P15498 845 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 EFHC1Q5JVL4 640 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 CHURC1Q8WUH1 139 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 COA1Q9GZY4 146 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 TDRD3Q9H7E2 651 aaKnown RBP11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ATXN10Q9UBB4 475 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 CLUHO75153 1309 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 AVILO75366 819 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 DLDP09622 509 aaKnown RBP11.91□□□□□ -0.5
TRUB1-201ENST00000298746 CYP24A1Q07973 514 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 STX3Q13277 289 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 MTMR1Q13613 665 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 DBN1Q16643 649 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 SEZ6Q53EL9 994 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 IYDQ6PHW0 289 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 NET1Q7Z628 596 aaPredicted RBP11.91□□□□□ -0.5
TRUB1-201ENST00000298746 TRIM74Q86UV6 250 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 TRIM73Q86UV7 250 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 AGR3Q8TD06 166 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ACER1Q8TDN7 264 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ITFG2Q969R8 447 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.91□□□□□ -0.5
TRUB1-201ENST00000298746 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 MYPNQ86TC9 1320 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 NAV1Q8NEY1 1877 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 DCAF8L1A6NGE4 600 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 SIGLEC16A6NMB1 481 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 F5H423 210 aaPredicted RBP11.91□□□□□ -0.5
TRUB1-201ENST00000298746 ADCY3O60266 1144 aa11.91□□□□□ -0.5
TRUB1-201ENST00000298746 TM7SF2O76062 418 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms