RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 ANKRD20A4Q4UJ75 823 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 APOBEC3HQ6NTF7 200 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 NMD3Q96D46 503 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 DNAJC19Q96DA6 116 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 DDX50Q9BQ39 737 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 SENP7Q9BQF6 1050 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 DNAJC18Q9H819 358 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 SETD4Q9NVD3 440 aa14.01□□□□□ -0.17
HPS3-201ENST00000296051 LSM7Q9UK45 103 aaKnown RBP14.01□□□□□ -0.17
HPS3-201ENST00000296051 TMEM150BA6NC51 233 aa14□□□□□ -0.17
HPS3-201ENST00000296051 VTNP04004 478 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ENO3P13929 434 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 ZNF200P98182 395 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 ROR1Q01973 937 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ECM1Q16610 540 aa14□□□□□ -0.17
HPS3-201ENST00000296051 PRELID2Q8N945 189 aa14□□□□□ -0.17
HPS3-201ENST00000296051 SHCBP1Q8NEM2 672 aa14□□□□□ -0.17
HPS3-201ENST00000296051 FAM84AQ96KN4 292 aa14□□□□□ -0.17
HPS3-201ENST00000296051 FSD1LQ9BXM9 530 aa14□□□□□ -0.17
HPS3-201ENST00000296051 NCOA4Q13772 614 aa14□□□□□ -0.17
HPS3-201ENST00000296051 TFDP2Q14188 446 aa14□□□□□ -0.17
HPS3-201ENST00000296051 C11orf63Q6NUN7 778 aa14□□□□□ -0.17
HPS3-201ENST00000296051 TTC39CQ8N584 583 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ZSWIM2Q8NEG5 633 aa14□□□□□ -0.17
HPS3-201ENST00000296051 NLGN2Q8NFZ4 835 aa14□□□□□ -0.17
HPS3-201ENST00000296051 CDC26Q8NHZ8 85 aa14□□□□□ -0.17
HPS3-201ENST00000296051 SENP6Q9GZR1 1112 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 SLC38A7Q9NVC3 462 aa14□□□□□ -0.17
HPS3-201ENST00000296051 PCDHB2Q9Y5E7 798 aa14□□□□□ -0.17
HPS3-201ENST00000296051 DLG5Q8TDM6 1919 aa14□□□□□ -0.17
HPS3-201ENST00000296051 STRNO43815 780 aa14□□□□□ -0.17
HPS3-201ENST00000296051 HLA-DRAP01903 254 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ARP10275 920 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ALDH1A3P47895 512 aa14□□□□□ -0.17
HPS3-201ENST00000296051 CACNA2D1P54289 1103 aa14□□□□□ -0.17
HPS3-201ENST00000296051 SP3Q02447 781 aa14□□□□□ -0.17
HPS3-201ENST00000296051 IRF2BP2Q7Z5L9 587 aa14□□□□□ -0.17
HPS3-201ENST00000296051 LNX1Q8TBB1 728 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 SPATA18Q8TC71 538 aa14□□□□□ -0.17
HPS3-201ENST00000296051 SEPT8Q92599 483 aa14□□□□□ -0.17
HPS3-201ENST00000296051 AGAP3Q96P47 875 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ABI2Q9NYB9 513 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 NINJ2Q9NZG7 142 aa14□□□□□ -0.17
HPS3-201ENST00000296051 THEGQ9P2T0 379 aa14□□□□□ -0.17
HPS3-201ENST00000296051 URB1O60287 2271 aaKnown RBP14□□□□□ -0.17
HPS3-201ENST00000296051 EME2A4GXA9 379 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 ZNF286BP0CG31 522 aa14□□□□□ -0.17
HPS3-201ENST00000296051 IRF1P10914 325 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ST8SIA6P61647 398 aa14□□□□□ -0.17
HPS3-201ENST00000296051 OCRLQ01968 901 aa14□□□□□ -0.17
HPS3-201ENST00000296051 EFHC2Q5JST6 749 aa14□□□□□ -0.17
HPS3-201ENST00000296051 ACAD10Q6JQN1 1059 aa14□□□□□ -0.17
HPS3-201ENST00000296051 IZUMO2Q6UXV1 221 aa14□□□□□ -0.17
HPS3-201ENST00000296051 SYDE1Q6ZW31 735 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 LRP10Q7Z4F1 713 aa14□□□□□ -0.17
HPS3-201ENST00000296051 L3MBTL3Q96JM7 780 aaPredicted RBP14□□□□□ -0.17
HPS3-201ENST00000296051 KRT7P08729 469 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 CREB1P16220 341 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 BGNP21810 368 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 CNTN2Q02246 1040 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 TRPM4Q8TD43 1214 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 IFT43Q96FT9 208 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 TTYH3Q9C0H2 523 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ZCWPW1Q9H0M4 648 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 GANQ9H2C0 597 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 RIOX1Q9H6W3 641 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 SP110Q9HB58 689 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 A0A0A6YYK5 440 aaPredicted RBP13.99□□□□□ -0.17
HPS3-201ENST00000296051 SOX10P56693 466 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ORC1Q13415 861 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ZNF662Q6ZS27 426 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ZNF720Q7Z2F6 126 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 KIAA1683Q9H0B3 1180 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 NEURL4Q96JN8 1562 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 O00370 1275 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 GPR182O15218 404 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 SNUPNO95149 360 aaKnown RBP13.99□□□□□ -0.17
HPS3-201ENST00000296051 ADRA1DP25100 572 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 TNFRSF8P28908 595 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 DSG3P32926 999 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 RCOR2Q8IZ40 523 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 OLFM3Q96PB7 478 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 MTMR9Q96QG7 549 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 OSMRQ99650 979 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 PDCD2LQ9BRP1 358 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 MCM8Q9UJA3 840 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 EML1O00423 815 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 PCSK1P29120 753 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 GEMIN4P57678 1058 aaKnown RBP13.99□□□□□ -0.17
HPS3-201ENST00000296051 LY6KQ17RY6 165 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
HPS3-201ENST00000296051 FBXO36Q8NEA4 188 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 HAS1Q92839 578 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 ENTPD7Q9NQZ7 604 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.99□□□□□ -0.17
HPS3-201ENST00000296051 GTSE1Q9NYZ3 720 aa13.99□□□□□ -0.17
HPS3-201ENST00000296051 MYH10P35580 1976 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms