RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 A6NHS1 94 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 E7ESA3 106 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 LPXNO60711 386 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 LRCH4O75427 683 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 PDHA1P08559 390 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 CD48P09326 243 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 NRLP54845 237 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 SESN3P58005 492 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 SP2Q02086 613 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 KHDC1Q4VXA5 237 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 ZC3H12AQ5D1E8 599 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 BBS12Q6ZW61 710 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 TEX9Q8N6V9 391 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 MTMR14Q8NCE2 650 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 DHX33Q9H6R0 707 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 FBXO6Q9NRD1 293 aaPredicted RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 HNRNPCL1O60812 293 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 MT-ND3P03897 115 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 OATP04181 439 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 ARL2P36404 184 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 PEX19P40855 299 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 BASP1P80723 227 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 DENND1BQ6P3S1 775 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 DSTYKQ6XUX3 929 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 IGDCC3Q8IVU1 814 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 PDIK1LQ8N165 341 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 FAM71DQ8N9W8 422 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 ALKBH8Q96BT7 664 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 PTCD3Q96EY7 689 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 PHACTR1Q9C0D0 580 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 NIF3L1Q9GZT8 377 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 DCLRE1BQ9H816 532 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 ZNF302Q9NR11 478 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 RPL26L1Q9UNX3 145 aaKnown RBP13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 RLFQ13129 1914 aa13.87□□□□□ -0.19
SLC28A1-201ENST00000286749 CCDC22O60826 627 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 LINGO3P0C6S8 592 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 KDELR1P24390 212 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 SERPINB3P29508 390 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 ARFIP2P53365 341 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 PTPN20Q4JDL3 420 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 NAIF1Q69YI7 327 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 BRSK2Q8IWQ3 736 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 KIAA0319LQ8IZA0 1049 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 TTC13Q8NBP0 860 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 SLC7A3Q8WY07 619 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 SERAC1Q96JX3 654 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 BTBD10Q9BSF8 475 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 TMEM120AQ9BXJ8 343 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 ZNF518BQ9C0D4 1074 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 SPATA31C2B4DYI2 1134 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 ITGBL1O95965 494 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 LMNAP02545 664 aaKnown RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 KRT7P08729 469 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 KRT3P12035 628 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 NEFHP12036 1026 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 EIF4BP23588 611 aaKnown RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 CDH5P33151 784 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 ZBTB16Q05516 673 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 GRIK3Q13003 919 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 PTK7Q13308 1070 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 TSNAXIP1Q2TAA8 658 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 SYCP2LQ5T4T6 812 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 CIAPIN1Q6FI81 312 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 LMNTD2Q8IXW0 634 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 EMC1Q8N766 993 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 DNAJC9Q8WXX5 260 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 TTC17Q96AE7 1141 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 ZBED3Q96IU2 234 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 CDHR1Q96JP9 859 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 TEPSINQ96N21 525 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 FAM111AQ96PZ2 611 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 LBHD1Q9BQE6 289 aaPredicted RBP13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 KCNK13Q9HB14 408 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 PCSK1NQ9UHG2 260 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 MGAMO43451 1857 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 PHIPQ8WWQ0 1821 aa13.86□□□□□ -0.19
SLC28A1-201ENST00000286749 PLSCR1O15162 318 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 BGNP21810 368 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 ELK3P41970 407 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 CAPSQ13938 189 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 MUM1Q2TAK8 710 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 FAM182AQ5T1J6 154 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 WDR49Q8IV35 697 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 SKA1Q96BD8 255 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 NSL1Q96IY1 281 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 CYTH2Q99418 400 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 TCHPQ9BT92 498 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 CYTH4Q9UIA0 394 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 PCDHGC3Q9UN70 934 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 EFR3BQ9Y2G0 817 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 LCTP09848 1927 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 GYG2O15488 501 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 GSC2O15499 205 aa13.85□□□□□ -0.19
SLC28A1-201ENST00000286749 NEK3P51956 506 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms