RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 CYP26B1Q9NR63 512 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 STX18Q9P2W9 335 aaKnown RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 ZNF212Q9UDV6 495 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 GRID1Q9ULK0 1009 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 PCDHGC3Q9UN70 934 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 SNCAIPQ9Y6H5 919 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CNTNAP2Q9UHC6 1331 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 DNAJC6O75061 913 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 EIF2AK2P19525 551 aaKnown RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 PHBP35232 272 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 CDKN2BP42772 138 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 RANBP1P43487 201 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 SERPINB4P48594 390 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 ARSEP51690 589 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 PKN2Q16513 984 aaKnown RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 ACSBG2Q5FVE4 666 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 MOB2Q70IA6 237 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 STMN2Q93045 179 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 AZIN2Q96A70 460 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 VPS11Q9H270 941 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 TMEM134Q9H6X4 195 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 AGO2Q9UKV8 859 aaKnown RBP10.88□□□□□ -0.67
SKA1-201ENST00000285116 SLC4A7Q9Y6M7 1214 aa10.88□□□□□ -0.67
SKA1-201ENST00000285116 C3orf70A6NLC5 250 aaPredicted RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 GSC2O15499 205 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 CREB3O43889 395 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 KRT36O76013 467 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 TGDSO95455 350 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 CD58P19256 250 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 GSTT1P30711 240 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 NAMPTP43490 491 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 LIG4P49917 911 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 KLHL38Q2WGJ6 581 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 WDR72Q3MJ13 1102 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 MFSD7Q6UXD7 560 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 OTOAQ7RTW8 1153 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 MTDHQ86UE4 582 aaKnown RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 CHSY1Q86X52 802 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 AGBL3Q8NEM8 1001 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 FNIP1Q8TF40 1166 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 JDP2Q8WYK2 163 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 ZNF184Q99676 751 aaPredicted RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 ZCWPW1Q9H0M4 648 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 ACSS3Q9H6R3 686 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 PCDHB4Q9Y5E5 795 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 COL4A5P29400 1685 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 PTPRJQ12913 1337 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 A0A0B4J269 797 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 TBX10O75333 385 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 KRT1P04264 644 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 TROVE2P10155 538 aaKnown RBP eCLIP10.87□□□□□ -0.67
SKA1-201ENST00000285116 RPA3P35244 121 aaPredicted RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 XKR3Q5GH77 459 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 HHATQ5VTY9 493 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 ABHD15Q6UXT9 468 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 ATP11CQ8NB49 1132 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 NCSTNQ92542 709 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 ZNF75CPQ92670 426 aaPredicted RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 POLR3FQ9H1D9 316 aaPredicted RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 MMADHCQ9H3L0 296 aaPredicted RBP10.87□□□□□ -0.67
SKA1-201ENST00000285116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.87□□□□□ -0.67
SKA1-201ENST00000285116 GABBR1Q9UBS5 961 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 CDH23Q9H251 3354 aa10.87□□□□□ -0.67
SKA1-201ENST00000285116 GYG2O15488 501 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 CALCAP01258 141 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 DHRS4L1P0CG22 281 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 CA4P22748 312 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 VPS41P49754 854 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 NLRP11P59045 1033 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 GPX6P59796 221 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 NOP14P78316 857 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 GPS1Q13098 491 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ARHGEF16Q5VV41 709 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 DAB2IPQ5VWQ8 1189 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 CYP4F22Q6NT55 531 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 LLGL2Q6P1M3 1020 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 CCNJLQ8IV13 435 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 PPIL6Q8IXY8 311 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 OPTNQ96CV9 577 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 RAVER2Q9HCJ3 691 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 CHCHD3Q9NX63 227 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 DDX43Q9NXZ2 648 aaKnown RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 RNF181Q9P0P0 153 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ZNF148Q9UQR1 794 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 CLUHO75153 1309 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 A8MXQ7 604 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 HAUS5O94927 633 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 CFHP08603 1231 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 WEE2P0C1S8 567 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 KRT15P19012 456 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 TNNI1P19237 187 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 ARL2P36404 184 aa10.86□□□□□ -0.67
SKA1-201ENST00000285116 SH3BGRP55822 239 aaPredicted RBP10.86□□□□□ -0.67
SKA1-201ENST00000285116 WNT7BP56706 349 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms