RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 NAT9Q9BTE0 207 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 ETNK1Q9HBU6 452 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 A0A0G2JPF8 293 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 HNRNPCL3B7ZW38 293 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 HNRNPCL4P0DMR1 293 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 GUF1Q8N442 669 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 COPG2Q9UBF2 871 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 TFRCP02786 760 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 GSPT1P15170 499 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 GCLMP48507 274 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 CUL4AQ13619 759 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 RDM1Q8NG50 284 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 CYFIP2Q96F07 1278 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 HBS1LQ9Y450 684 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 POTEMA6NI47 508 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 PFKFB3Q16875 520 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 POTEHQ6S545 545 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 POTEGQ6S5H5 508 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 TMEM110Q86TL2 294 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 RFFLQ8WZ73 363 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 DPF3Q92784 378 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 MND1Q9BWT6 205 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 UGGT1Q9NYU2 1555 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 ECDO95905 644 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 FTCDO95954 541 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 F9P00740 461 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 URODP06132 367 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 TRIP13Q15645 432 aaPredicted RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 WDR72Q3MJ13 1102 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 PABPC5Q96DU9 382 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 PRKCBP05771 671 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 PGK2P07205 417 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 FAM83EQ2M2I3 478 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF394Q53GI3 561 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 RNF149Q8NC42 400 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 BBS2Q9BXC9 721 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 CD274Q9NZQ7 290 aa13.74□□□□□ -0.21
PRDM16-201ENST00000270722 NOVA2Q9UNW9 492 aaKnown RBP13.74□□□□□ -0.21
PRDM16-201ENST00000270722 SH3D21A4FU49 640 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 SULT1B1O43704 296 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ALOX5P09917 674 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 MRNIPQ6NTE8 343 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 C17orf75Q9HAS0 396 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 MROH7-TTC4A0A0A0MT08 1334 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 LRRC14BA6NHZ5 514 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 IFRD1O00458 451 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 NDUFB5O43674 189 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 CENPAP49450 140 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 VBP1P61758 197 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 MOV10Q9HCE1 1003 aaKnown RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 TMCC3Q9ULS5 477 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 LGALS16A8MUM7 142 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 GPR182O15218 404 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 SRGAP2O75044 1071 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 IL6P05231 212 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 PRKAA1Q13131 559 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF248Q8NDW4 579 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ATL2Q8NHH9 583 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 FAM45AQ8TCE6 357 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 OSBPL3Q9H4L5 887 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 SMYD3Q9H7B4 428 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ASAP1Q9ULH1 1129 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 KLHL2O95198 593 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 HNRNPH1P31943 449 aaKnown RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 RNF135Q8IUD6 432 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 CCNJLQ8IV13 435 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 VSTM4Q8IW00 320 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 LINC00301Q8NCQ3 95 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ARHGEF26Q96DR7 871 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 CLIC4Q9Y696 253 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 EPHA7Q15375 998 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 STAG2Q8N3U4 1231 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 PIGOQ8TEQ8 1089 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 CINPQ9BW66 212 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 RSAD1Q9HA92 442 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 C20orf96Q9NUD7 363 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 TRPM5Q9NZQ8 1165 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 SF3B1O75533 1304 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ARHGEF33A8MVX0 844 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 GCLCP48506 637 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 GTF2A2P52657 109 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ITGA9Q13797 1035 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 CLEC4FQ8N1N0 589 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 SEPT5Q99719 369 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 PHACTR1Q9C0D0 580 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 MCUBQ9NWR8 336 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 PZPP20742 1482 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.73□□□□□ -0.21
PRDM16-201ENST00000270722 F8VZ95 297 aa13.73□□□□□ -0.21
PRDM16-201ENST00000270722 HBP1O60381 514 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms