RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 MUM1Q2TAK8 710 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 STK32AQ8WU08 396 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 PRPF31Q8WWY3 499 aaKnown RBP17.61■□□□□ 0.41
SQLE-201ENST00000265896 PGLYRP2Q96PD5 576 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 DDX50Q9BQ39 737 aaKnown RBP17.61■□□□□ 0.41
SQLE-201ENST00000265896 MANSC1Q9H8J5 431 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 SLC17A6Q9P2U8 582 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 MT-ND3P03897 115 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 RBP3P10745 1247 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 KDSRQ06136 332 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 CAPSQ13938 189 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 RINLQ6ZS11 566 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 SPATA18Q8TC71 538 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 NLRP4Q96MN2 994 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 CPXM1Q96SM3 734 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 PIDD1Q9HB75 910 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 CYP39A1Q9NYL5 469 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 CNTNAP2Q9UHC6 1331 aa17.61■□□□□ 0.41
SQLE-201ENST00000265896 ONECUT3O60422 494 aaPredicted RBP17.6■□□□□ 0.41
SQLE-201ENST00000265896 FYB2Q5VWT5 728 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 STYK1Q6J9G0 422 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 NIPA1Q7RTP0 329 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 CYTH2Q99418 400 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 TMEM120AQ9BXJ8 343 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 MYOZ2Q9NPC6 264 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 ZNF302Q9NR11 478 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 WASF2Q9Y6W5 498 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 LTBP4Q8N2S1 1624 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 EIF3EP60228 445 aaKnown RBP17.6■□□□□ 0.41
SQLE-201ENST00000265896 PTK7Q13308 1070 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 MORF4L2Q15014 288 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 ANO7Q6IWH7 933 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 ABHD15Q6UXT9 468 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 VPS52Q8N1B4 723 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 PPP1R13LQ8WUF5 828 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 TWNKQ96RR1 684 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 TSSK1BQ9BXA7 367 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 PDLIM7Q9NR12 457 aa17.6■□□□□ 0.41
SQLE-201ENST00000265896 COL4A5P29400 1685 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 CXorf49A8MYA2 514 aaPredicted RBP17.59■□□□□ 0.41
SQLE-201ENST00000265896 GYG2O15488 501 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 DCTN3O75935 186 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 MYL2P10916 166 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
SQLE-201ENST00000265896 DARS2Q6PI48 645 aaKnown RBP17.59■□□□□ 0.41
SQLE-201ENST00000265896 ZNF677Q86XU0 584 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 RNF149Q8NC42 400 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 TMEM35BQ8NCS4 154 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 NSUN6Q8TEA1 469 aaKnown RBP17.59■□□□□ 0.41
SQLE-201ENST00000265896 MCUR1Q96AQ8 359 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 IKBKGQ9Y6K9 419 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 A0A0B4J269 797 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 SMNDC1O75940 238 aaKnown RBP eCLIP17.59■□□□□ 0.41
SQLE-201ENST00000265896 ENO1P06733 434 aaKnown RBP17.59■□□□□ 0.41
SQLE-201ENST00000265896 RGS7P49802 495 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 ARFIP2P53365 341 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 ARL4CP56559 192 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 LRRC36Q1X8D7 754 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.59■□□□□ 0.411e-6■■■□□ 16.2
SQLE-201ENST00000265896 GRAMD1AQ96CP6 724 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 IL1RAPL1Q9NZN1 696 aa17.59■□□□□ 0.41
SQLE-201ENST00000265896 PRPF4O43172 522 aaKnown RBP eCLIP17.58■□□□□ 0.411e-6■■□□□ 13.4
SQLE-201ENST00000265896 ZNF699Q32M78 642 aa17.58■□□□□ 0.41
SQLE-201ENST00000265896 ACSBG2Q5FVE4 666 aa17.58■□□□□ 0.41
SQLE-201ENST00000265896 UNC5BQ8IZJ1 945 aa17.58■□□□□ 0.41
SQLE-201ENST00000265896 AGGF1Q8N302 714 aaeCLIP17.58■□□□□ 0.41
SQLE-201ENST00000265896 EFCAB3Q8N7B9 438 aa17.58■□□□□ 0.41
SQLE-201ENST00000265896 WRNIP1Q96S55 665 aa17.58■□□□□ 0.41
SQLE-201ENST00000265896 NMUR2Q9GZQ4 415 aa17.58■□□□□ 0.41
SQLE-201ENST00000265896 SMG5Q9UPR3 1016 aaKnown RBP17.58■□□□□ 0.41
SQLE-201ENST00000265896 TCRBV9S1A1TA0A576 114 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 MEI4A8MW99 385 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 H7C0C1 242 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 HAUS5O94927 633 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 LINGO3P0C6S8 592 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 GNAZP19086 355 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 ATP5OP48047 213 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 TGFB2P61812 414 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 IGBP1P78318 339 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 ACVR2BQ13705 512 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 MAB21L3Q8N8X9 362 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 ARMC2Q8NEN0 867 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 NRG4Q8WWG1 115 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 MMP19Q99542 508 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 CGRRF1Q99675 332 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 SYT15Q9BQS2 421 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 ZCWPW1Q9H0M4 648 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 MAGED2Q9UNF1 606 aaPredicted RBP17.58■□□□□ 0.4
SQLE-201ENST00000265896 H3BRJ5 948 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 CAPN9O14815 690 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 TROVE2P10155 538 aaKnown RBP eCLIP17.58■□□□□ 0.4
SQLE-201ENST00000265896 AMPD1P23109 780 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 SNRPFP62306 86 aaKnown RBP17.58■□□□□ 0.4
SQLE-201ENST00000265896 LMNB2Q03252 620 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 XKR3Q5GH77 459 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 BSPRYQ5W0U4 402 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 ATP11CQ8NB49 1132 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 DCAKDQ8WVC6 231 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 RAB6BQ9NRW1 208 aa17.58■□□□□ 0.4
SQLE-201ENST00000265896 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms