RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 MICALL1Q8N3F8 863 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 PWWP2AQ96N64 755 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 RBM15Q96T37 977 aaKnown RBP eCLIP11.73□□□□□ -0.53
MSH3-201ENST00000265081 PRMT1Q99873 361 aaKnown RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 INTS9Q9NV88 658 aaKnown RBP11.73□□□□□ -0.53
MSH3-201ENST00000265081 NAALADL1Q9UQQ1 740 aa11.73□□□□□ -0.53
MSH3-201ENST00000265081 ACSL3O95573 720 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 PECAM1P16284 738 aaPredicted RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 TMEM132DQ14C87 1099 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 GALNTL6Q49A17 601 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 ARHGEF2Q92974 986 aaKnown RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 CFAP57Q96MR6 1250 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 RABEP2Q9H5N1 569 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CYLDQ9NQC7 956 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 SLC24A2Q9UI40 661 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 PI4K2BG5E9Z4 385 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 P4HA1P13674 534 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 PSMA2P25787 234 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 GCLCP48506 637 aaPredicted RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 TRIP13Q15645 432 aaPredicted RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 DCUN1D2Q6PH85 259 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 OLFML1Q6UWY5 402 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 SCARA5Q6ZMJ2 495 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 BNIPLQ7Z465 357 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 TMEM110Q86TL2 294 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 TRABD2AQ86V40 505 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 SUGP1Q8IWZ8 645 aaKnown RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 LRRC34Q8IZ02 419 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CACNA2D3Q8IZS8 1091 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 TMEM130Q8N3G9 435 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CPT1BQ92523 772 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CENPIQ92674 756 aaPredicted RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 KLHL11Q9NVR0 708 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CTNNAL1Q9UBT7 734 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 USTQ9Y2C2 406 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CDH8P55286 799 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 GPX6P59796 221 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 CCNA1P78396 465 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 ACVR2BQ13705 512 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 ARHGAP17Q68EM7 881 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 LRRC52Q8N7C0 313 aa11.72□□□□□ -0.53
MSH3-201ENST00000265081 METTL5Q9NRN9 209 aaKnown RBP11.72□□□□□ -0.53
MSH3-201ENST00000265081 CLUHO75153 1309 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.53
MSH3-201ENST00000265081 TMEM120BA0PK00 339 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 DNM1LO00429 736 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 C1QAP02745 245 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 PSMC1P62191 440 aaKnown RBP11.71□□□□□ -0.53
MSH3-201ENST00000265081 RBP5P82980 135 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 CDC42EP1Q00587 391 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 C9orf131Q5VYM1 1079 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 CGB2Q6NT52 195 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 UPF1Q92900 1129 aaKnown RBP eCLIP11.71□□□□□ -0.53
MSH3-201ENST00000265081 HPDLQ96IR7 371 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 MAGEB18Q96M61 343 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 ADCY6O43306 1168 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 SNX3O60493 162 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 GABBR2O75899 941 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 CREB1P16220 341 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 SMPD1P17405 629 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 IL4RP24394 825 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 GDF10P55107 478 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 MYO1EQ12965 1108 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 XRCC4Q13426 336 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 NOMO1Q15155 1222 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 SLC9A4Q6AI14 798 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 PRUNE1Q86TP1 453 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 PPIL6Q8IXY8 311 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 CPB2Q96IY4 423 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 MAML3Q96JK9 1138 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 DPP3Q9NY33 737 aa11.71□□□□□ -0.53
MSH3-201ENST00000265081 ZSCAN5DPP0CG00 497 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 ETS1P14921 441 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 MIPP30301 263 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 GRIK4Q16099 956 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 HADHQ16836 314 aaKnown RBP11.71□□□□□ -0.54
MSH3-201ENST00000265081 SLC35F5Q8WV83 523 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 FAM118BQ9BPY3 351 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 CNPY3Q9BT09 278 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 TYROBPO43914 113 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 ASMTLO95671 621 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 CYP2C8P10632 490 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 OTUD4Q01804 1114 aaKnown RBP11.71□□□□□ -0.54
MSH3-201ENST00000265081 KCNJ11Q14654 390 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 ZDHHC17Q8IUH5 632 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 CCDC13Q8IYE1 715 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 MIS12Q9H081 205 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 RSAD1Q9HA92 442 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 PNPLA8Q9NP80 782 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 TMEM51Q9NW97 253 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 SENP1Q9P0U3 644 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 USP18Q9UMW8 372 aa11.71□□□□□ -0.54
MSH3-201ENST00000265081 GNEQ9Y223 722 aaKnown RBP11.71□□□□□ -0.54
MSH3-201ENST00000265081 BTBD19C9JJ37 291 aa11.7□□□□□ -0.54
MSH3-201ENST00000265081 ANKRD65E5RJM6 399 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms