RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 CYFIP2Q96F07 1278 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 PRPF18Q99633 342 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 MRFAP1Q9Y605 127 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SHMT1P34896 483 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 NCKAP1LP55160 1127 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 NAF1Q96HR8 494 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 PDGFCQ9NRA1 345 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 NDE1Q9NXR1 346 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 WWOXQ9NZC7 414 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 XPO7Q9UIA9 1087 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 NFASCO94856 1347 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 ANO9A1A5B4 782 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 CLASP2O75122 1294 aaKnown RBP14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SMIM10L2AP0DMW4 78 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SMIM10L2BP0DMW5 78 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 PTPN3P26045 913 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 LCA5Q86VQ0 697 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 TRPM4Q8TD43 1214 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 CAPN10Q9HC96 672 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 STK39Q9UEW8 545 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 SLIT1O75093 1534 aa14.13□□□□□ -0.15
PDGFRB-201ENST00000261799 PHF20L1A8MW92 1017 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 IRF6O14896 467 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 HSPA1AP0DMV8 641 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 HSPA1BP0DMV9 641 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ATP1A3P13637 1013 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 EEF1B2P24534 225 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 FDFT1P37268 417 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CTCFP49711 727 aaPredicted RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 TBX4P57082 545 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SLC39A12Q504Y0 691 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CXCL17Q6UXB2 119 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 NUDCD3Q8IVD9 361 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 FEZF2Q8TBJ5 459 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 APBB2Q92870 758 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 HPS3Q969F9 1004 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SLC13A1Q9BZW2 595 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ZCCHC2Q9C0B9 1178 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ELOVL4Q9GZR5 314 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CDY2AQ9Y6F7 541 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 TBC1D3BA6NDS4 549 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ZSCAN9O15535 394 aaPredicted RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 DCTN3O75935 186 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 PGK1P00558 417 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 POLBP06746 335 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 AKAP5P24588 427 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SERPINB9P50453 376 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ZC3H12BQ5HYM0 836 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 KIAA1324Q6UXG2 1013 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SLFN11Q7Z7L1 901 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 BLOC1S5Q8TDH9 187 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CCDC78A2IDD5 438 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SRP72O76094 671 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 IGSF6O95976 241 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 MSH3P20585 1137 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 COBLL1Q53SF7 1204 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 EFL1Q7Z2Z2 1120 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SF3B1O75533 1304 aaKnown RBP eCLIP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 RIC1Q4ADV7 1423 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CRTAMO95727 393 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 APRTP07741 180 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SETSIPP0DME0 302 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ZBTB48P10074 688 aaPredicted RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 RAP1GAPP47736 663 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 BOLA3Q53S33 107 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CELF3Q5SZQ8 465 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 CEP19Q96LK0 163 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 PPARGC1AQ9UBK2 798 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 STX19Q8N4C7 294 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 C1orf131Q8NDD1 294 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SLC35G2Q8TBE7 412 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 SPIRE2Q8WWL2 714 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 HIPK3Q9H422 1215 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 YY1AP1Q9H869 796 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 LIMA1Q9UHB6 759 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 ANGPTL2Q9UKU9 493 aa14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 TPX2Q9ULW0 747 aaKnown RBP14.12□□□□□ -0.15
PDGFRB-201ENST00000261799 GAKO14976 1311 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 AK9Q5TCS8 1911 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 KRT87PA6NCN2 255 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TKTL1P51854 596 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 CSE1LP55060 971 aaKnown RBP14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 NNTQ13423 1086 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 ACOX1Q15067 660 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TACO1Q9BSH4 297 aaKnown RBP14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 RUBCNLQ9H714 662 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 RAB6BQ9NRW1 208 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 SLC37A4O43826 429 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TSPAN3O60637 253 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 DIAPH2O60879 1101 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 PARNO95453 639 aaKnown RBP14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 FGFR4P22455 802 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 HALP42357 657 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 TMCO5AQ8N6Q1 288 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 OTULINQ96BN8 352 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 NRBF2Q96F24 287 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 BTBD6Q96KE9 485 aa14.11□□□□□ -0.15
PDGFRB-201ENST00000261799 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms