RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TMEM192Q8IY95 271 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 TTC13Q8NBP0 860 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 CPXM1Q96SM3 734 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 FOXP3Q9BZS1 431 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 PDLIM7Q9NR12 457 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 FAM49BQ9NUQ9 324 aa13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.21□□□□□ -0.29
RAB3IP-201ENST00000247833 KCNN4O15554 427 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 AVILO75366 819 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 LRCH4O75427 683 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 ZBED1O96006 694 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 IL1R2P27930 398 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 MIPP30301 263 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 BNIP1Q12981 228 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 PTK7Q13308 1070 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 TAF11Q15544 211 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 C15orf59Q2T9L4 293 aaPredicted RBP13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 TAF1BQ53T94 588 aaPredicted RBP13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 MDH1BQ5I0G3 518 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 NLRP9Q7RTR0 991 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 TRPM4Q8TD43 1214 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 CPB2Q96IY4 423 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 MARCOQ9UEW3 520 aaPredicted RBP13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 SHOC2Q9UQ13 582 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 MAFBQ9Y5Q3 323 aaPredicted RBP13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 CNTNAP2Q9UHC6 1331 aa13.21□□□□□ -0.3
RAB3IP-201ENST00000247833 TCRBV7S3A2A0A539 114 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 DESP17661 470 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 ELK3P41970 407 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 BAG6P46379 1132 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 PTP4A2Q12974 167 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 GJC2Q5T442 439 aaPredicted RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 IER5Q5VY09 327 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 PCGF5Q86SE9 256 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 MPHOSPH6Q99547 160 aaKnown RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 FARP2O94887 1054 aaPredicted RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 NFICP08651 508 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 EPHB2P29323 1055 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 RASSF2P50749 326 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 TAP1Q03518 808 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 KCTD2Q14681 263 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 SURF1Q15526 300 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 ZNF75CPQ92670 426 aaPredicted RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 NUDCD1Q96RS6 583 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 ACO2Q99798 780 aaKnown RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 SLC17A7Q9P2U7 560 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 LGALS13Q9UHV8 139 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 SKAP2O75563 359 aaPredicted RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 LSM8O95777 96 aaKnown RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 KDELR1P24390 212 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 AP3M2P53677 418 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 MSS51Q4VC12 460 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 TRIM55Q9BYV6 548 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
RAB3IP-201ENST00000247833 KCNA3P22001 575 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 CPA2P48052 419 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 RAD23BP54727 409 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 SH3PXD2AQ5TCZ1 1133 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 CCDC62Q6P9F0 684 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 MPZL3Q6UWV2 235 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 PPP1R13LQ8WUF5 828 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 NLRP7Q8WX94 980 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 FAM167AQ96KS9 214 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 RILPQ96NA2 401 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 CYTH2Q99418 400 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 ASNSD1Q9NWL6 643 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 PGAP2Q9UHJ9 254 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 MAGED2Q9UNF1 606 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 UNC5CO95185 931 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 ASMTLO95671 621 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 BCAR1P56945 870 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 PTPN11Q06124 597 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 MGAT5Q09328 741 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 ZPBP2Q6X784 338 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 CPT1BQ92523 772 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 IQANK1A0A1B0GTG1 560 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 KBTBD13C9JR72 458 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 COPEO14579 308 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 ALOX15BO15296 676 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 P4HA1P13674 534 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 ARFIP2P53365 341 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 OAZ1P54368 228 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 OTOAQ7RTW8 1153 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 TSSK1BQ9BXA7 367 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 ASCC2Q9H1I8 757 aaPredicted RBP13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 CHKBQ9Y259 395 aa13.19□□□□□ -0.3
RAB3IP-201ENST00000247833 C2orf71A6NGG8 1288 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 431.4 ms