RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TBC1D13Q9NVG8 400 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 USTQ9Y2C2 406 aa16.04■□□□□ 0.16
HDHD3-201ENST00000238379 TARSL2A2RTX5 802 aaKnown RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 F8W810 466 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 PIK3R2O00459 728 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 KRIT1O00522 736 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 PSTPIP1O43586 416 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 PARNO95453 639 aaKnown RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 GJA8P48165 433 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 CLUL1Q15846 466 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 LONRF2Q1L5Z9 754 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 FAM102AQ5T9C2 384 aaPredicted RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 CC2D1AQ6P1N0 951 aaPredicted RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 FAM183BPQ6ZVS7 135 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 COLGALT2Q8IYK4 626 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 CRIPAKQ8N1N5 446 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 HASPINQ8TF76 798 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 PIWIL1Q96J94 861 aaKnown RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 SUSD3Q96L08 255 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 NAP1L3Q99457 506 aaPredicted RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 RTP3Q9BQQ7 232 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 NR2E1Q9Y466 385 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 TANC1Q9C0D5 1861 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 CYP2C18P33260 490 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
HDHD3-201ENST00000238379 MDH1BQ5I0G3 518 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 SEL1L2Q5TEA6 688 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 OR6B2Q6IFH4 312 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 OLFML1Q6UWY5 402 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 EMC1Q8N766 993 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 HDAC7Q8WUI4 952 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 KRT12Q99456 494 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 TBX21Q9UL17 535 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 CDH9Q9ULB4 789 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 PCDHB7Q9Y5E2 793 aa16.03■□□□□ 0.16
HDHD3-201ENST00000238379 SCN5AQ14524 2016 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.02■□□□□ 0.16
HDHD3-201ENST00000238379 CCDC188H7C350 402 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 TMEM189-UBE2V1I3L0A0 370 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 CLDN5O00501 218 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 PAPSS1O43252 624 aaPredicted RBP16.02■□□□□ 0.16
HDHD3-201ENST00000238379 CAPN15O75808 1086 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 TUBBP07437 444 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 TCF4P15884 667 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 PSMA2P25787 234 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 PLA2G4AP47712 749 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 SNX16P57768 344 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 PLCB3Q01970 1234 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 GLE1Q53GS7 698 aaKnown RBP16.02■□□□□ 0.16
HDHD3-201ENST00000238379 LRRC38Q5VT99 294 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 SCUBE3Q8IX30 993 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 ANKLE1Q8NAG6 615 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 DUSP16Q9BY84 665 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 B3GNT5Q9BYG0 378 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 CYLDQ9NQC7 956 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
HDHD3-201ENST00000238379 DSEQ9UL01 958 aa16.02■□□□□ 0.16
HDHD3-201ENST00000238379 MYBPHLA2RUH7 354 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 XPO1O14980 1071 aaKnown RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 PCSK1P29120 753 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 CLCN6P51797 869 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 LBX1P52954 281 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 VSNL1P62760 191 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 MRPS25P82663 173 aaKnown RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 RNASELQ05823 741 aaKnown RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 TRNP1Q6NT89 227 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 C8orf74Q6P047 294 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 METTL23Q86XA0 190 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ZDHHC17Q8IUH5 632 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 KATNAL2Q8IYT4 538 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ZDHHC14Q8IZN3 488 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ARFGAP1Q8N6T3 406 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 KHSRPQ92945 711 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 HSFY1Q96LI6 401 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 CASD1Q96PB1 797 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 DNAJB4Q9UDY4 337 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ATP11BQ9Y2G3 1177 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 TTC3P53804 2025 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 CCDC151A5D8V7 595 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 C2CD4BA6NLJ0 364 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 NPR3P17342 541 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 SSR1P43307 286 aaKnown RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ACADSBP45954 432 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 SLC6A3Q01959 620 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 BRD3Q15059 726 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 TAF5Q15542 800 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ADAT2Q7Z6V5 191 aaKnown RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 SLC13A5Q86YT5 568 aaPredicted RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ABI1Q8IZP0 508 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 MYCBPAPQ8TBZ2 947 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 PCED1BQ96HM7 432 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ACBD6Q9BR61 282 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 PLVAPQ9BX97 442 aa16.01■□□□□ 0.15
HDHD3-201ENST00000238379 ARGLU1Q9NWB6 273 aaPredicted RBP16.01■□□□□ 0.15
HDHD3-201ENST00000238379 TSC2P49815 1807 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms